myRT

myRT report for GCA_003020005.1_ASM302000v1

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Seq: CP020093.1 Lactobacillus plantarum strain K25 chromosome, complete genome (3175846 bp)
Overview 1 RT 1: 994541-998024 bp Neighborhood of RT #1 [994541, 998035] RVT-GII RVT-GII GIIM fumC Feature: gene Location: 994541-994678 bp Feature: gene Location: 994790-994948 bp Feature: gene Location: 995010-995270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 995118-995265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9951 1 8-995265 bp Feature: gene Location: 995371-995805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 995374-995737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 995374-995737 bp Feature: gene Location: 995849-996178 bp Feature: domain Description: GIIM Note: maturase Location: 995855-996005 bp Feature: domain Description: GIIM Note: maturase Location: 995855-996005 bp Feature: gene Location: 996653-998035 bp Feature: domain Description: fumC Location: 996656-998024 bp Feature: domain Description: fumC Location: 996656-998024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), fumC (PRK00485)

Seq: CP020095.1 Lactobacillus plantarum strain K25 plasmid unnamed2, complete sequence (42993 bp)
Overview 1 RT 1: 794-5561 bp Neighborhood of RT #1 [794, 5561] MFS_MelB_like PinE RVT-GII RVT-GII GIIM PRK09564 Feature: gene Location: 794-1048 bp Feature: domain Description: MFS_MelB_like Location: 878-1034 bp Feature: domain Description: MFS_MelB_like Location: 878-1034 bp Feature: gene Location: 1145-1732 bp Feature: domain Description: PinE Location: 1148-1724 bp Feature: domain Description: PinE Location: 1148-172 4 bp Feature: gene Location: 2281-3009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2599-2959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 599-2 959 bp Feature: gene Location: 2979-3662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2982-3216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 982 -32 16 bp Feature: domain Description: GIIM Note: maturase Location: 3270-3498 bp Feature: domain Description: GIIM Note: maturase Location: 32 70-3498 bp Feature: gene Location: 3799-5163 bp Feature: domain Description: PRK09564 Location: 3814-5137 bp Feature: domain Description: PRK09564 Location: 3814-5137 bp Feature: gene Location: 5295-5561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MelB_like (cd17332), PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09564 (coenzyme A disulfide reductase; Reviewed)