myRT

myRT report for GCA_003020705.1_ASM302070v1

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Seq: CP027506.1 Enterococcus faecium strain AUSMDU00004055 chromosome, complete genome (2731844 bp)
Overview 1 RT 1: 2603464-2608504 bp Neighborhood of RT #1 [2603464, 2608518] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 2603464-2603607 bp Feature: gene Location: 2603700-2604884 bp Feature: domain Description: HTH_XRE Location: 2603730-2603874 bp Feature: domain Description: HTH_XRE Location: 2603730-2603874 bp Feature: domain Description: Rol_Rep_N Location: 2603907-2604171 bp Feature: domain Description: Rol_Rep_N Location: 2603907-26041 71 bp Feature: domain Description: Rep_trans Location: 2604195-2604807 bp Feature: domain Description: Rep_trans Location: 26041 95-2604807 bp Feature: gene Location: 2605764-2607674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2606097-2606835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2606097-2606835 bp Feature: domain Description: HNHc Note: nucleases Location: 2607390-2607555 bp Feature: domain Description: HNHc Note: nucleases Location: 2607390-2607555 bp Feature: gene Location: 2607862-2608002 bp Feature: gene Location: 2608015-2608518 bp Feature: domain Description: ArdA Location: 2608033-2608504 bp Feature: domain Description: ArdA Location: 2608033-2608504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: CP027508.1 Enterococcus faecium strain AUSMDU00004055 plasmid unnamed2, complete sequence (53613 bp)
Overview 1 RT 1: 22952-28805 bp Neighborhood of RT #1 [22952, 28924] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 22952-24646 bp Feature: domain Description: VirB4 Location: 23270-23954 bp Feature: domain Description: VirB4 Location: 2 32 70-2 3954 bp Feature: gene Location: 24914-25147 bp Feature: gene Location: 25334-27211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25649-26387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5649-2 6387 bp Feature: domain Description: HNHc Note: nucleases Location: 26945-27098 bp Feature: domain Description: HNHc Note: nucleases Location: 2 6945-2 7098 bp Feature: gene Location: 27399-27719 bp Feature: gene Location: 27719-28924 bp Feature: domain Description: Glucosaminidase Location: 27995-28391 bp Feature: domain Description: Glucosaminidase Location: 2 7995-2 8391 bp Feature: domain Description: Peptidase_M23 Location: 28568-28805 bp Feature: domain Description: Peptidase_M2 3 Location: 2 8568-2 8805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)