myRT

myRT report for GCA_003020725.1_ASM302072v1

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Seq: CP027512.1 Enterococcus faecium strain AUSMDU00004028 chromosome, complete genome (2855729 bp)
Overview 1 RT 1: 587467-601425 bp 2 RT 2: 760140-764681 bp 3 RT 3: 2727472-2740217 bp Neighborhood of RT #1 [587467, 601643] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 7tmA_5-HT1A_invertebrates 7tmA_5-HT1A_invertebrates Neighborhood of RT #2 [760140, 764689] RVT-GII Intron_maturas2 HNHc VirD4 Maff2 Neighborhood of RT #3 [2727472, 2740217] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 587467-588852 bp Feature: domain Description: FtsK Location: 588076-588709 bp Feature: domain Description: FtsK Location: 588076-588709 bp Feature: gene Location: 589030-590235 bp Feature: domain Description: HTH_XRE Location: 589075-589219 bp Feature: domain Description: HTH_XRE Location: 589075-58921 9 bp Feature: domain Description: Rol_Rep_N Location: 589246-589513 bp Feature: domain Description: Rol_Rep_N Location: 589246-58951 3 bp Feature: domain Description: Rep_trans Location: 589537-590146 bp Feature: domain Description: Rep_trans Location: 589537-5901 46 bp Feature: gene Location: 591019-592929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591352-592090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591 352-592090 bp Feature: domain Description: HNHc Note: nucleases Location: 592645-592810 bp Feature: domain Description: HNHc Note: nucleases Location: 592645-59281 0 bp Feature: gene Location: 593090-593257 bp Feature: gene Location: 593374-593871 bp Feature: domain Description: ArdA Location: 593392-593857 bp Feature: domain Description: ArdA Location: 593392-593857 bp Feature: gene Location: 593855-594352 bp Feature: domain Description: TcpE Location: 593978-594278 bp Feature: domain Description: TcpE Location: 593978-594278 bp Feature: gene Location: 594336-595889 bp Feature: domain Description: AAA_10 Location: 595668-595854 bp Feature: domain Description: AAA_1 0 Location: 595668-595854 bp Feature: gene Location: 596586-598412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 596886-597585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 596886-597585 bp Feature: gene Location: 598546-599463 bp Feature: domain Description: AAA_10 Location: 598552-599431 bp Feature: domain Description: AAA_1 0 Location: 598552-599431 bp Feature: gene Location: 599466-601643 bp Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 599769-600027 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 599769-600027 bp Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 600978-601425 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 600978-601 425 bp Feature: gene Location: 760140-760640 bp Feature: gene Location: 761044-761193 bp Feature: gene Location: 761200-763017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761464-762283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761 464-762283 bp Feature: domain Description: Intron_maturas2 Location: 762355-762658 bp Feature: domain Description: Intron_maturas2 Location: 762355-762658 bp Feature: domain Description: HNHc Note: nucleases Location: 762838-762982 bp Feature: domain Description: HNHc Note: nucleases Location: 762838-762982 bp Feature: gene Location: 763108-764451 bp Feature: domain Description: VirD4 Location: 763150-764314 bp Feature: domain Description: VirD4 Location: 7631 50-76431 4 bp Feature: gene Location: 764495-764689 bp Feature: domain Description: Maff2 Location: 764531-764681 bp Feature: domain Description: Maff2 Location: 764531 -764681 bp Feature: gene Location: 2727472-2727615 bp Feature: gene Location: 2727708-2728892 bp Feature: domain Description: HTH_XRE Location: 2727738-2727882 bp Feature: domain Description: HTH_XRE Location: 2727738-2727882 bp Feature: domain Description: Rol_Rep_N Location: 2727915-2728179 bp Feature: domain Description: Rol_Rep_N Location: 272791 5-27281 79 bp Feature: domain Description: Rep_trans Location: 2728203-2728815 bp Feature: domain Description: Rep_trans Location: 2728203-272881 5 bp Feature: gene Location: 2729772-2731682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730105-2730843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27301 05-2730843 bp Feature: domain Description: HNHc Note: nucleases Location: 2731398-2731563 bp Feature: domain Description: HNHc Note: nucleases Location: 2731 398-2731 563 bp Feature: gene Location: 2731870-2732010 bp Feature: gene Location: 2732023-2732526 bp Feature: domain Description: ArdA Location: 2732041-2732512 bp Feature: domain Description: ArdA Location: 2732041 -273251 2 bp Feature: gene Location: 2732586-2732975 bp Feature: domain Description: TcpE Location: 2732604-2732904 bp Feature: domain Description: TcpE Location: 2732604-2732904 bp Feature: gene Location: 2732962-2734512 bp Feature: domain Description: AAA_10 Location: 2734291-2734474 bp Feature: domain Description: AAA_1 0 Location: 2734291 -2734474 bp Feature: gene Location: 2735209-2737035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2735509-2736208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2735509-2736208 bp Feature: gene Location: 2737169-2738089 bp Feature: domain Description: AAA_10 Location: 2737175-2738054 bp Feature: domain Description: AAA_1 0 Location: 27371 75-2738054 bp Feature: gene Location: 2738094-2740217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275), TcpE (pfam12648), AAA_10 (pfam12846), 7tmA_5-HT1A_invertebrates (cd15331)
Intron_maturas2 (pfam01348), VirD4 (COG3505), Maff2 (pfam12750)

Seq: CP027513.1 Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence (184337 bp)
Overview 1 RT 1: 11641-21430 bp Neighborhood of RT #1 [11641, 21430] VirD4 VirD4 RVT-GII HNH_4 TraG-D_C Feature: gene Location: 11641-13704 bp Feature: gene Location: 13704-15533 bp Feature: domain Description: VirD4 Location: 14115-14958 bp Feature: domain Description: VirD4 Location: 14115-14958 bp Feature: domain Description: VirD4 Location: 15345-15507 bp Feature: domain Description: VirD4 Location: 15345-15507 bp Feature: gene Location: 16228-18144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16567-17302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16567-17302 bp Feature: domain Description: HNH_4 Location: 17896-18001 bp Feature: domain Description: HNH_4 Location: 17896-18001 bp Feature: gene Location: 18270-19061 bp Feature: domain Description: TraG-D_C Location: 18273-18579 bp Feature: domain Description: TraG-D_C Location: 182 73-18579 bp Feature: gene Location: 19058-21430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, HNH_4 (pfam13395), TraG-D_C (pfam12696)