myRT

myRT report for GCA_003020745.1_ASM302074v1

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Seq: CP027517.1 Enterococcus faecium strain AUSMDU00004024 chromosome, complete genome (2863087 bp)
Overview 1 RT 1: 1846503-1853113 bp 2 RT 2: 2731086-2743831 bp Neighborhood of RT #1 [1846503, 1853184] Transposase_mut AAA_10 RVT-GII AAA_10 TcpE Neighborhood of RT #2 [2731086, 2743831] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 1846503-1847690 bp Feature: domain Description: Transposase_mut Location: 1846506-1847649 bp Feature: domain Description: Transposase_mut Location: 1 846506-1 847649 bp Feature: gene Location: 1847783-1848601 bp Feature: domain Description: AAA_10 Location: 1847789-1848587 bp Feature: domain Description: AAA_1 0 Location: 1 847789-1 848587 bp Feature: gene Location: 1848735-1850561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849035-1849734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 849035-1 849734 bp Feature: gene Location: 1851258-1852808 bp Feature: domain Description: AAA_10 Location: 1852587-1852770 bp Feature: domain Description: AAA_1 0 Location: 1 852587-1 852770 bp Feature: gene Location: 1852795-1853184 bp Feature: domain Description: TcpE Location: 1852813-1853113 bp Feature: domain Description: TcpE Location: 1 85281 3-1 8531 1 3 bp Feature: gene Location: 2731086-2731229 bp Feature: gene Location: 2731322-2732506 bp Feature: domain Description: HTH_XRE Location: 2731352-2731496 bp Feature: domain Description: HTH_XRE Location: 2731 352-2731 496 bp Feature: domain Description: Rol_Rep_N Location: 2731529-2731793 bp Feature: domain Description: Rol_Rep_N Location: 2731 529-2731 793 bp Feature: domain Description: Rep_trans Location: 2731817-2732429 bp Feature: domain Description: Rep_trans Location: 2731 81 7-2732429 bp Feature: gene Location: 2733386-2735296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2733719-2734457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273371 9-2734457 bp Feature: domain Description: HNHc Note: nucleases Location: 2735012-2735177 bp Feature: domain Description: HNHc Note: nucleases Location: 273501 2-27351 77 bp Feature: gene Location: 2735484-2735624 bp Feature: gene Location: 2735637-2736140 bp Feature: domain Description: ArdA Location: 2735655-2736126 bp Feature: domain Description: ArdA Location: 2735655-27361 26 bp Feature: gene Location: 2736200-2736589 bp Feature: domain Description: TcpE Location: 2736218-2736518 bp Feature: domain Description: TcpE Location: 273621 8-273651 8 bp Feature: gene Location: 2736576-2738126 bp Feature: domain Description: AAA_10 Location: 2737905-2738088 bp Feature: domain Description: AAA_1 0 Location: 2737905-2738088 bp Feature: gene Location: 2738823-2740649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2739123-2739822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27391 23-2739822 bp Feature: gene Location: 2740783-2741703 bp Feature: domain Description: AAA_10 Location: 2740789-2741668 bp Feature: domain Description: AAA_1 0 Location: 2740789-2741 668 bp Feature: gene Location: 2741708-2743831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), HNHc (smart00507), ArdA (pfam07275)

Seq: CP027518.1 Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence (259384 bp)
Overview 1 RT 1: 24359-30212 bp Neighborhood of RT #1 [24359, 30331] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 24359-26053 bp Feature: domain Description: VirB4 Location: 24677-25361 bp Feature: domain Description: VirB4 Location: 2 4677-2 5361 bp Feature: gene Location: 26321-26554 bp Feature: gene Location: 26741-28618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27056-27794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7056-2 7794 bp Feature: domain Description: HNHc Note: nucleases Location: 28352-28505 bp Feature: domain Description: HNHc Note: nucleases Location: 2 8352 -2 8505 bp Feature: gene Location: 28806-29126 bp Feature: gene Location: 29126-30331 bp Feature: domain Description: Glucosaminidase Location: 29402-29798 bp Feature: domain Description: Glucosaminidase Location: 2 9402 -2 9798 bp Feature: domain Description: Peptidase_M23 Location: 29975-30212 bp Feature: domain Description: Peptidase_M2 3 Location: 2 9975-302 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)