myRT

myRT report for GCA_003030045.1_ASM303004v1

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Seq: CP028181.1 Klebsiella pneumoniae strain CFSAN054110 plasmid pGMI16-005_01, complete sequence (227967 bp)
Overview 1 RT 1: 165029-168131 bp Neighborhood of RT #1 [165029, 168145] RVT-GII PRK10276 Feature: gene Location: 165029-165307 bp Feature: gene Location: 165366-165596 bp Feature: gene Location: 165830-167314 bp Ori: AVS29943.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166232-166922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 66232-1 66922 bp Feature: gene Location: 167314-167565 bp Feature: gene Location: 167720-168145 bp Ori: AVS29945.1 Feature: domain Description: PRK10276 Location: 167723-168131 bp Feature: domain Description: PRK1 0276 Location: 1 67723-1 681 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP028180.1 Klebsiella pneumoniae strain CFSAN054110 chromosome, complete genome (5438150 bp)
Overview 1 RT 1: 1963506-1968378 bp 2 RT 2: 3204148-3208286 bp 3 RT 3: 3390423-3394522 bp 4 RT 4: 3726985-3731011 bp 5 RT 5: 3734696-3739534 bp 6 RT 6: 4178101-4180881 bp Neighborhood of RT #1 [1963506, 1968392] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3204148, 3208286] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3390423, 3394533] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3726985, 3731895] DinI RVT-GII Phage_GPA Neighborhood of RT #5 [3734696, 3739584] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #6 [4178101, 4180881] PRK10276 PRK10276 RVT-GII Feature: gene Location: 1963506-1964675 bp Ori: AVS26332.1 Feature: domain Description: dacD Location: 1963515-1964670 bp Feature: domain Description: dacD Location: 1963515-1964670 bp Feature: gene Location: 1964945-1965196 bp Feature: gene Location: 1965196-1966680 bp Ori: AVS26334.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1965598-1966288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1965598-19662 88 bp Feature: gene Location: 1966762-1967235 bp Ori: AVS26335.1 Feature: domain Description: PRK10016 Location: 1966765-1967224 bp Feature: domain Description: PRK10016 Location: 1966765-19672 2 4 bp Feature: gene Location: 1967334-1968392 bp Ori: AVS26336.1 Feature: domain Description: YccC Location: 1967340-1968378 bp Feature: domain Description: YccC Location: 1967340-1968378 bp Feature: gene Location: 3204148-3205413 bp Ori: AVS27516.1 Feature: domain Description: umuC Location: 3204151-3205411 bp Feature: domain Description: umuC Location: 32 04151-32 05411 bp Feature: gene Location: 3205415-3205834 bp Ori: AVS27517.1 Feature: domain Description: PRK10276 Location: 3205418-3205829 bp Feature: domain Description: PRK102 76 Location: 32 05418-32 0582 9 bp Feature: gene Location: 3205914-3207398 bp Ori: AVS27518.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3206316-3207006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 06316-32 07006 bp Feature: gene Location: 3207398-3207649 bp Feature: gene Location: 3208197-3208286 bp Feature: gene Location: 3390423-3391688 bp Ori: AVS27704.1 Feature: domain Description: umuC Location: 3390426-3391686 bp Feature: domain Description: umuC Location: 339042 6-3391686 bp Feature: gene Location: 3391691-3392110 bp Ori: AVS27705.1 Feature: domain Description: PRK10276 Location: 3391694-3392105 bp Feature: domain Description: PRK102 76 Location: 3391694-3392 105 bp Feature: gene Location: 3392189-3393673 bp Ori: AVS27706.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3392591-3393281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3392 591-33932 81 bp Feature: gene Location: 3393673-3393924 bp Feature: gene Location: 3394291-3394533 bp Ori: AVS27708.1 Feature: domain Description: DinI Location: 3394342-3394522 bp Feature: domain Description: DinI Location: 3394342 -339452 2 bp Feature: gene Location: 3726985-3727290 bp Ori: AVS28015.1 Feature: domain Description: DinI Location: 3727099-3727285 bp Feature: domain Description: DinI Location: 372 7099-372 72 85 bp Feature: gene Location: 3727229-3727417 bp Feature: gene Location: 3727518-3729002 bp Ori: AVS28016.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3727920-3728610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372 792 0-372 8610 bp Feature: gene Location: 3729002-3729253 bp Feature: gene Location: 3729481-3731895 bp Ori: AVS28018.1 Feature: domain Description: Phage_GPA Location: 3730045-3731011 bp Feature: domain Description: Phage_GPA Location: 3730045-3731011 bp Feature: gene Location: 3734696-3735574 bp Ori: AVS29716.1 Feature: domain Description: Phage_CI_repr Location: 3734723-3734906 bp Feature: domain Description: Phage_CI_repr Location: 373472 3-3734906 bp Feature: domain Description: Phage_CI_repr Location: 3735035-3735227 bp Feature: domain Description: Phage_CI_repr Location: 3735035-37352 2 7 bp Feature: domain Description: Phage_CI_C Location: 3735254-3735548 bp Feature: domain Description: Phage_CI_C Location: 37352 54-3735548 bp Feature: gene Location: 3735586-3736530 bp Feature: gene Location: 3736629-3738113 bp Ori: AVS28027.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3737031-3737721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3737031-373772 1 bp Feature: gene Location: 3738113-3738364 bp Feature: gene Location: 3738532-3739584 bp Ori: AVS28029.1 Feature: domain Description: int Location: 3738535-3739534 bp Feature: domain Description: int Location: 3738535-3739534 bp Feature: gene Location: 4178101-4178418 bp Ori: AVS28415.1 Feature: domain Description: PRK10276 Location: 4178107-4178221 bp Feature: domain Description: PRK102 76 Location: 4178107-41782 2 1 bp Feature: domain Description: PRK10276 Location: 4178248-4178317 bp Feature: domain Description: PRK102 76 Location: 41782 48-4178317 bp Feature: gene Location: 4178418-4178657 bp Feature: gene Location: 4178735-4180219 bp Ori: AVS28417.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4179137-4179827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4179137-417982 7 bp Feature: gene Location: 4180219-4180470 bp Feature: gene Location: 4180672-4180881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), Phage_GPA (pfam05840), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)
int (PHA02601)