myRT

myRT report for GCA_003030245.1_ASM303024v1

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Seq: CP028195.1 Escherichia coli strain CFSAN018748 plasmid pGMI14-004_1, complete sequence (68950 bp)
Overview 1 RT 1: 4369-8272 bp Neighborhood of RT #1 [4369, 8272] DUF1281 RVT_N RVT-GII GIIM HNHc PRK13699 Feature: gene Location: 4369-4579 bp Feature: domain Description: DUF1281 Location: 4372-4477 bp Feature: domain Description: DUF1 281 Location: 4372-4477 bp Feature: gene Location: 4583-4887 bp Feature: gene Location: 5117-6817 bp Ori: AVS50261.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5171-5414 bp Feature: domain Description: RVT_N Location: 51 71 -541 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5459-6095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5459-6095 bp Feature: domain Description: GIIM Note: maturase Location: 6146-6380 bp Feature: domain Description: GIIM Note: maturase Location: 61 46-6380 bp Feature: domain Description: HNHc Note: nucleases Location: 6611-6761 bp Feature: domain Description: HNHc Note: nucleases Location: 661 1 -6761 bp Feature: gene Location: 7397-8050 bp Ori: AVS50262.1 Feature: domain Description: PRK13699 Location: 7442-8048 bp Feature: domain Description: PRK1 3699 Location: 7442-8048 bp Feature: gene Location: 8051-8272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK13699 (putative methylase; Provisional)