myRT

myRT report for GCA_003031325.1_ASM303132v1

Download annotations/find similar RTs

Seq: CP024875.1 Klebsiella pneumoniae strain NH25 plasmid pNH25.1, complete sequence (227692 bp)
Overview 1 RT 1: 181481-185777 bp Neighborhood of RT #1 [181481, 185833] INT_Cre_C RVT-GII Rve Feature: gene Location: 181481-181798 bp Feature: gene Location: 181864-183000 bp Ori: AVT91734.1 Feature: domain Description: INT_Cre_C Location: 182287-182941 bp Feature: domain Description: INT_Cre_C Location: 1 82287-1 82941 bp Feature: gene Location: 183086-184570 bp Ori: AVT91735.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183488-184178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 83488-1 841 78 bp Feature: gene Location: 184703-184954 bp Feature: gene Location: 185129-185833 bp Ori: AVT91736.1 Feature: domain Description: Rve Location: 185132-185777 bp Feature: domain Description: Rve Location: 1 851 32-1 85777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, Rve (COG3316)

Seq: CP024874.1 Klebsiella pneumoniae strain NH25 chromosome, complete genome (5369387 bp)
Overview 1 RT 1: 1841622-1845720 bp 2 RT 2: 1916229-1920476 bp 3 RT 3: 2147501-2150175 bp 4 RT 4: 4886085-4893433 bp Neighborhood of RT #1 [1841622, 1845731] umuC PRK10276 RVT-GII DinI Neighborhood of RT #2 [1916229, 1920476] umuC PRK10276 RVT-GII Neighborhood of RT #3 [2147501, 2150177] RVT-GII sula Neighborhood of RT #4 [4886085, 4893483] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 1841622-1842887 bp Ori: AVT88175.1 Feature: domain Description: umuC Location: 1841625-1842885 bp Feature: domain Description: umuC Location: 184162 5-1842 885 bp Feature: gene Location: 1842890-1843309 bp Ori: AVT88176.1 Feature: domain Description: PRK10276 Location: 1842893-1843304 bp Feature: domain Description: PRK102 76 Location: 1842 893-1843304 bp Feature: gene Location: 1843388-1844872 bp Ori: AVT88177.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1843790-1844480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1843790-1844480 bp Feature: gene Location: 1845005-1845241 bp Feature: gene Location: 1845489-1845731 bp Ori: AVT88178.1 Feature: domain Description: DinI Location: 1845540-1845720 bp Feature: domain Description: DinI Location: 1845540-184572 0 bp Feature: gene Location: 1916229-1917494 bp Ori: AVT88255.1 Feature: domain Description: umuC Location: 1916232-1917492 bp Feature: domain Description: umuC Location: 19162 32 -1917492 bp Feature: gene Location: 1917496-1917915 bp Ori: AVT88256.1 Feature: domain Description: PRK10276 Location: 1917499-1917910 bp Feature: domain Description: PRK102 76 Location: 1917499-1917910 bp Feature: gene Location: 1917994-1919478 bp Ori: AVT88257.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1918396-1919086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1918396-1919086 bp Feature: gene Location: 1919611-1919850 bp Feature: gene Location: 1920387-1920476 bp Feature: gene Location: 2147501-2147758 bp Feature: gene Location: 2147727-2147972 bp Feature: gene Location: 2148105-2149589 bp Ori: AVT88472.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2148507-2149197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 148507-2 149197 bp Feature: gene Location: 2149535-2149771 bp Feature: gene Location: 2149668-2150177 bp Ori: AVT88474.1 Feature: domain Description: sula Location: 2149674-2150175 bp Feature: domain Description: sula Location: 2 149674-2 150175 bp Feature: gene Location: 4886085-4886849 bp Ori: AVT90901.1 Feature: domain Description: FimC Location: 4886130-4886832 bp Feature: domain Description: FimC Location: 4886130-4886832 bp Feature: gene Location: 4886896-4889490 bp Ori: AVT90902.1 Feature: domain Description: FimD Location: 4886938-4889479 bp Feature: domain Description: FimD Location: 4886938-4889479 bp Feature: gene Location: 4889487-4891568 bp Ori: AVT90903.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4889898-4890342 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4889898-4890342 bp Feature: gene Location: 4891610-4892065 bp Ori: AVT90904.1 Feature: domain Description: Integrase_1 Location: 4891613-4891847 bp Feature: domain Description: Integrase_1 Location: 4891613-4891847 bp Feature: gene Location: 4892245-4893483 bp Feature: domain Description: PRK09692 Location: 4892251-4893433 bp Feature: domain Description: PRK09692 Location: 4892 2 51-4893433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), sula (TIGR00623), FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: CP024876.1 Klebsiella pneumoniae strain NH25 plasmid pNH25.2, complete sequence (129299 bp)
Overview 1 RT 1: 78453-82655 bp Neighborhood of RT #1 [78453, 82672] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 78453-79124 bp Ori: AVT91872.1 Feature: domain Description: Plasmid_stab_B Location: 78468-78675 bp Feature: domain Description: Plasmid_stab_B Location: 78468-78675 bp Feature: domain Description: Plasmid_stab_B Location: 78780-78987 bp Feature: domain Description: Plasmid_stab_B Location: 78780-78987 bp Feature: gene Location: 79127-80098 bp Ori: AVT91873.1 Feature: domain Description: StbA Location: 79130-80075 bp Feature: domain Description: StbA Location: 7913 0-80075 bp Feature: gene Location: 80347-81831 bp Ori: AVT91874.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80749-81439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80749-8143 9 bp Feature: gene Location: 81831-82082 bp Feature: gene Location: 82241-82672 bp Ori: AVT91876.1 Feature: domain Description: PRK10276 Location: 82292-82655 bp Feature: domain Description: PRK10276 Location: 82292-82655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)