myRT

myRT report for GCA_003031735.1_ASM303173v1

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Seq: CP020509.1 Escherichia coli strain 165 chromosome, complete genome (5087166 bp)
Overview 1 RT 1: 692863-698327 bp 2 RT 2: 1982762-1986744 bp Neighborhood of RT #1 [692863, 698335] InsE RVT-GII GIIM PHA02517 LldP Neighborhood of RT #2 [1982762, 1986770] Asparaginase_2 RVT-GII RVT-GII DcuC Feature: gene Location: 692863-693602 bp Feature: domain Description: InsE Location: 692866-693202 bp Feature: domain Description: InsE Location: 692866-693202 bp Feature: gene Location: 693595-693966 bp Feature: gene Location: 694260-695783 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 694533-695265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 694533-695265 bp Feature: domain Description: GIIM Note: maturase Location: 695340-695538 bp Feature: domain Description: GIIM Note: maturase Location: 695340-695538 bp Feature: gene Location: 695864-696352 bp Feature: domain Description: PHA02517 Location: 695867-696341 bp Feature: domain Description: PHA0251 7 Location: 695867-696341 bp Feature: gene Location: 696782-698335 bp Ori: AVU43959.1 Feature: domain Description: LldP Location: 696794-698327 bp Feature: domain Description: LldP Location: 696794-698327 bp Feature: gene Location: 1982762-1983793 bp Ori: AVU45106.1 Feature: domain Description: Asparaginase_2 Location: 1982852-1983785 bp Feature: domain Description: Asparaginase_2 Location: 1 982852-1 983785 bp Feature: gene Location: 1983951-1984153 bp Feature: gene Location: 1984201-1984365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1984204-1984360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 984204-1 984360 bp Feature: gene Location: 1984317-1984763 bp Ori: AVU45107.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1984623-1984725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 984623-1 984725 bp Feature: gene Location: 1985129-1985356 bp Feature: gene Location: 1985409-1986770 bp Ori: AVU45108.1 Feature: domain Description: DcuC Location: 1985412-1986744 bp Feature: domain Description: DcuC Location: 1 98541 2-1 986744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), LldP (COG1620), Asparaginase_2 (pfam01112), DcuC (TIGR00771)

Seq: CP020511.1 Escherichia coli strain 165 plasmid unnamed2, complete sequence (85008 bp)
Overview 1 RT 1: 68686-71822 bp Neighborhood of RT #1 [68686, 71822] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 68686-68892 bp Feature: gene Location: 68996-69282 bp Feature: gene Location: 69856-71523 bp Ori: AVU48440.1 Gene: ltrA Feature: domain Description: RVT_N Location: 69904-70141 bp Feature: domain Description: RVT_N Location: 69904-70141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70192-70834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70192 -70834 bp Feature: domain Description: GIIM Note: maturase Location: 70885-71119 bp Feature: domain Description: GIIM Note: maturase Location: 70885-71119 bp Feature: domain Description: HNHc Note: nucleases Location: 71329-71488 bp Feature: domain Description: HNHc Note: nucleases Location: 7132 9-71488 bp Feature: gene Location: 71501-71686 bp Feature: gene Location: 71724-71822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)