myRT

myRT report for GCA_003044255.1_ASM304425v1

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Seq: CP028435.1 Shewanella putrefaciens strain WS13 chromosome, complete genome (4384460 bp)
Overview 1 RT 1: 210881-216719 bp 2 RT 2: 2664413-2669693 bp Neighborhood of RT #1 [210881, 216910] PRK04940 UPF0167 RVT-GII GIIM HNH_5 Zn_Tnp_IS91 Y2_Tnp Neighborhood of RT #2 [2664413, 2669693] Na_Pro_sym RVT_N RVT-GII GIIM Feature: gene Location: 210881-211231 bp Ori: AVV82104.1 Feature: domain Description: PRK04940 Location: 210884-211226 bp Feature: domain Description: PRK04940 Location: 21 0884-21 1 226 bp Feature: gene Location: 211877-212308 bp Ori: AVV82105.1 Feature: domain Description: UPF0167 Location: 211880-212300 bp Feature: domain Description: UPF01 67 Location: 21 1 880-21 2300 bp Feature: gene Location: 213097-214446 bp Ori: AVV82106.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213379-213997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 3379-21 3997 bp Feature: domain Description: GIIM Note: maturase Location: 214045-214249 bp Feature: domain Description: GIIM Note: maturase Location: 21 4045-21 4249 bp Feature: gene Location: 214528-215427 bp Ori: AVV82107.1 Feature: domain Description: HNH_5 Location: 214552-214744 bp Feature: domain Description: HNH_5 Location: 21 4552-21 4744 bp Feature: gene Location: 215792-216910 bp Ori: AVV82108.1 Feature: domain Description: Zn_Tnp_IS91 Location: 215822-216089 bp Feature: domain Description: Zn_Tnp_IS91 Location: 21 5822-21 6089 bp Feature: domain Description: Y2_Tnp Location: 216215-216719 bp Feature: domain Description: Y2_Tnp Location: 21 621 5-21 671 9 bp Feature: gene Location: 2664413-2665147 bp Ori: AVV84629.1 Feature: domain Description: Na_Pro_sym Location: 2664431-2665145 bp Feature: domain Description: Na_Pro_sym Location: 2664431 -26651 45 bp Feature: gene Location: 2665151-2665327 bp Feature: gene Location: 2666195-2667667 bp Ori: AVV84631.1 Feature: domain Description: RVT_N Location: 2666243-2666486 bp Feature: domain Description: RVT_N Location: 2666243-2666486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2666531-2667158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2666531 -26671 58 bp Feature: domain Description: GIIM Note: maturase Location: 2667215-2667443 bp Feature: domain Description: GIIM Note: maturase Location: 266721 5-2667443 bp Feature: gene Location: 2668780-2669505 bp Feature: gene Location: 2669547-2669693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04940 (hypothetical protein; Provisional), UPF0167 (pfam03691), RVT-GII, GIIM (pfam08388), HNH_5 (pfam14279), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), Na_Pro_sym (TIGR02121), RVT_N (pfam13655)