myRT

myRT report for GCA_003052005.2_ASM305200v2

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Seq: CP028584.2 Pseudomonas aeruginosa strain WCHPA075019 chromosome, complete genome (6886080 bp)
Overview 1 RT 1: 657268-665434 bp 2 RT 2: 4037123-4044239 bp Neighborhood of RT #1 [657268, 665448] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 Neighborhood of RT #2 [4037123, 4044250] clpP tig RVT_N RVT-GII GIIM HNH OmpR PRK10604 Feature: gene Location: 657268-658560 bp Ori: AVZ17343.1 Feature: domain Description: PRK10770 Location: 657358-658552 bp Feature: domain Description: PRK1 0770 Location: 657358-658552 bp Feature: gene Location: 658541-661315 bp Ori: AVZ17344.1 Feature: domain Description: LptD Location: 658736-661301 bp Feature: domain Description: LptD Location: 658736-661 301 bp Feature: gene Location: 661448-663160 bp Ori: AVZ17345.1 Gene: ltrA Feature: domain Description: RVT_N Location: 661505-661748 bp Feature: domain Description: RVT_N Location: 661 505-661 748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661793-662426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661 793-662426 bp Feature: domain Description: YkfC Location: 662639-662789 bp Feature: domain Description: YkfC Location: 662639-662789 bp Feature: domain Description: HNH Note: nucleases Location: 662966-663104 bp Feature: domain Description: HNH Note: nucleases Location: 662966-6631 04 bp Feature: gene Location: 663347-663559 bp Feature: gene Location: 664432-665448 bp Ori: AVZ17347.1 Feature: domain Description: COG3178 Location: 664435-665434 bp Feature: domain Description: COG31 78 Location: 664435-665434 bp Feature: gene Location: 4037123-4037764 bp Ori: AVZ20283.1 Feature: domain Description: clpP Location: 4037177-4037753 bp Feature: domain Description: clpP Location: 40371 77-4037753 bp Feature: gene Location: 4037858-4039168 bp Ori: AVZ20284.1 Feature: domain Description: tig Location: 4037861-4039139 bp Feature: domain Description: tig Location: 4037861 -40391 39 bp Feature: gene Location: 4039298-4041001 bp Ori: AVZ20285.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4039355-4039598 bp Feature: domain Description: RVT_N Location: 4039355-4039598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4039643-4040279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4039643-4040279 bp Feature: domain Description: GIIM Note: maturase Location: 4040330-4040564 bp Feature: domain Description: GIIM Note: maturase Location: 4040330-4040564 bp Feature: domain Description: HNH Note: nucleases Location: 4040816-4040954 bp Feature: domain Description: HNH Note: nucleases Location: 404081 6-4040954 bp Feature: gene Location: 4042256-4042963 bp Ori: AVZ20286.1 Feature: domain Description: OmpR Location: 4042280-4042946 bp Feature: domain Description: OmpR Location: 4042280-4042946 bp Feature: gene Location: 4042964-4044250 bp Ori: AVZ20287.1 Feature: domain Description: PRK10604 Location: 4042967-4044239 bp Feature: domain Description: PRK1 0604 Location: 4042967-4044239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), clpP, tig (TIGR00115), GIIM (pfam08388)
OmpR (COG0745), PRK10604 (sensor protein RstB; Provisional)