myRT

myRT report for GCA_003052765.1_ASM305276v1

Download annotations/find similar RTs

Seq: CP028730.1 Shewanella baltica strain 128 chromosome, complete genome (4896215 bp)
Overview 1 RT 1: 1726574-1731421 bp 2 RT 2: 2218126-2226722 bp Neighborhood of RT #1 [1726574, 1731423] RVT-GII GIIM integrase_gron Neighborhood of RT #2 [2218126, 2226722] HsdM RMtype1_S_EcoKI-TRD2-CR2_like HsdS RMtype1_S_EcoKI-TRD2-CR2_like RVT-UG1 Feature: gene Location: 1726574-1727551 bp Feature: gene Location: 1727984-1728172 bp Feature: gene Location: 1728352-1729701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1728634-1729252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 728634-1 729252 bp Feature: domain Description: GIIM Note: maturase Location: 1729300-1729504 bp Feature: domain Description: GIIM Note: maturase Location: 1 729300-1 729504 bp Feature: gene Location: 1729783-1730091 bp Feature: gene Location: 1730464-1731423 bp Feature: domain Description: integrase_gron Location: 1730482-1731421 bp Feature: domain Description: integrase_gron Location: 1 730482-1 731 421 bp Feature: gene Location: 2218126-2219628 bp Feature: domain Description: HsdM Location: 2218132-2219590 bp Feature: domain Description: HsdM Location: 221 81 32-221 9590 bp Feature: gene Location: 2219628-2221520 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 2220039-2220564 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 2220039-2220564 bp Feature: domain Description: HsdS Location: 2220606-2220906 bp Feature: domain Description: HsdS Location: 2220606-2220906 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 2220924-2221503 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 2220924-2221 503 bp Feature: gene Location: 2221532-2225407 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2222171-2222732 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 22221 71 -2222732 bp Feature: gene Location: 2225410-2225850 bp Feature: gene Location: 2225874-2226722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), integrase_gron (TIGR02249), HsdM (COG0286), RMtype1_S_EcoKI-TRD2-CR2_like (cd17261), HsdS (COG0732), RVT-UG1