myRT

myRT report for GCA_003054785.2_ASM305478v2

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Seq: CP044980.1 Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence (262775 bp)
Overview 1 RT 1: 19026-24240 bp 2 RT 2: 92280-100016 bp 3 RT 3: 151763-157372 bp Neighborhood of RT #1 [19026, 24242] COG4928 RVT_N RVT-GII DUF5412 Neighborhood of RT #2 [92280, 100195] RVT-GII TraG-D_C Ftsk_gamma rpsA Neighborhood of RT #3 [151763, 157377] RVT_N RVT-GII PRK07726 topB PRK08173 Feature: gene Location: 19026-21191 bp Ori: QFQ28844.1 Feature: domain Description: COG4928 Location: 19038-20415 bp Feature: domain Description: COG4928 Location: 1 9038-2041 5 bp Feature: gene Location: 21436-21525 bp Feature: gene Location: 21541-23204 bp Gene: ltrA Feature: domain Description: RVT_N Location: 21589-21835 bp Feature: domain Description: RVT_N Location: 21 589-21 835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21889-22354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 889-22354 bp Feature: gene Location: 23293-23472 bp Feature: gene Location: 23856-24242 bp Ori: QFQ28846.1 Feature: domain Description: DUF5412 Location: 23886-24240 bp Feature: domain Description: DUF541 2 Location: 23886-24240 bp Feature: gene Location: 92280-92666 bp Feature: gene Location: 92684-94363 bp Feature: gene Location: 95039-96913 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95339-95717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95339-9571 7 bp Feature: gene Location: 97146-98828 bp Feature: domain Description: TraG-D_C Location: 97158-97473 bp Feature: domain Description: TraG-D_C Location: 971 58-97473 bp Feature: domain Description: Ftsk_gamma Location: 97881-98061 bp Feature: domain Description: Ftsk_gamma Location: 97881 -98061 bp Feature: gene Location: 99212-100195 bp Ori: QFQ28901.1 Feature: domain Description: rpsA Location: 99479-100016 bp Feature: domain Description: rpsA Location: 99479-1 0001 6 bp Feature: gene Location: 151763-152095 bp Feature: gene Location: 152469-152648 bp Feature: gene Location: 152737-154402 bp Gene: ltrA Feature: domain Description: RVT_N Location: 152785-152929 bp Feature: domain Description: RVT_N Location: 1 52785-1 52929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153487-153748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 53487-1 53748 bp Feature: gene Location: 154418-154507 bp Feature: gene Location: 154714-157377 bp Ori: QFQ28945.1 Feature: domain Description: PRK07726 Location: 154723-156676 bp Feature: domain Description: PRK07726 Location: 1 54723-1 56676 bp Feature: domain Description: topB Location: 156838-156952 bp Feature: domain Description: topB Location: 1 56838-1 56952 bp Feature: domain Description: PRK08173 Location: 157096-157372 bp Feature: domain Description: PRK081 73 Location: 1 57096-1 57372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4928 (Predicted P-loop ATPase, KAP-like ), RVT_N (pfam13655), RVT-GII, DUF5412 (pfam17428), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717), PRK07726 (DNA topoisomerase 3), topB (TIGR01056), PRK08173 (DNA topoisomerase III; Validated)

Seq: CP044978.1 Bacillus thuringiensis strain BT62 chromosome, complete genome (5294964 bp)
Overview 1 RT 1: 509496-513970 bp Neighborhood of RT #1 [509496, 513993] DEDD_Tnp_IS110 COG3547 RVT-GII PRK10420 DUF4870 Feature: gene Location: 509496-509798 bp Feature: gene Location: 510213-511358 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 510228-510702 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5102 2 8-510702 bp Feature: domain Description: COG3547 Location: 510954-511317 bp Feature: domain Description: COG3547 Location: 510954-511317 bp Feature: gene Location: 511288-511518 bp Ori: QFQ23852.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511336-511456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511336-511456 bp Feature: gene Location: 511718-513379 bp Ori: QFQ23853.1 Gene: lldP Feature: domain Description: PRK10420 Location: 511721-513377 bp Feature: domain Description: PRK1042 0 Location: 51172 1-513377 bp Feature: gene Location: 513676-513993 bp Ori: QFQ23854.1 Feature: domain Description: DUF4870 Location: 513694-513970 bp Feature: domain Description: DUF4870 Location: 513694-513970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), COG3547 (Transposase ), RVT-GII, PRK10420 (L-lactate permease; Provisional), DUF4870 (pfam09685)

Seq: CP044979.1 Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence (561791 bp)
Overview 1 RT 1: 272822-277283 bp 2 RT 2: 471073-478855 bp Neighborhood of RT #1 [272822, 277384] INT_C_like_3 RVT_N RVT-GII PAP2_BcrC_like Neighborhood of RT #2 [471073, 479034] RVT-GII TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 272822-273082 bp Feature: gene Location: 273345-273912 bp Feature: domain Description: INT_C_like_3 Location: 273375-273648 bp Feature: domain Description: INT_C_like_3 Location: 273 3 75-273 648 bp Feature: gene Location: 274078-275740 bp Gene: ltrA Feature: domain Description: RVT_N Location: 274126-274372 bp Feature: domain Description: RVT_N Location: 274126-2743 72 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274708-274828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274708-274828 bp Feature: gene Location: 276393-276755 bp Feature: gene Location: 276785-277384 bp Ori: QFQ28628.1 Feature: domain Description: PAP2_BcrC_like Location: 276857-277283 bp Feature: domain Description: PAP2_BcrC_like Location: 276857-277283 bp Feature: gene Location: 471073-471546 bp Feature: gene Location: 471564-473243 bp Feature: gene Location: 473920-475795 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 474220-474913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 474220-474913 bp Feature: gene Location: 476027-477793 bp Ori: QFQ28749.1 Feature: domain Description: TraG-D_C Location: 476039-476357 bp Feature: domain Description: TraG-D_C Location: 47603 9-4763 57 bp Feature: domain Description: Ftsk_gamma Location: 476783-476963 bp Feature: domain Description: Ftsk_gamma Location: 476783 -476963 bp Feature: domain Description: Ftsk_gamma Location: 477116-477263 bp Feature: domain Description: Ftsk_gamma Location: 477116-477263 bp Feature: gene Location: 478051-479034 bp Ori: QFQ28750.1 Feature: domain Description: rpsA Location: 478318-478855 bp Feature: domain Description: rpsA Location: 4783 18-478855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_3 (cd01192), RVT_N (pfam13655), RVT-GII, PAP2_BcrC_like (cd03385), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)