myRT

myRT report for GCA_003069525.1_ASM306952v1

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Seq: CP028932.1 Klebsiella pneumoniae strain AR_0153 chromosome, complete genome (5341581 bp)
Overview 1 RT 1: 843990-848274 bp 2 RT 2: 1040161-1045042 bp 3 RT 3: 2096814-2104195 bp 4 RT 4: 4943380-4946164 bp Neighborhood of RT #1 [843990, 848274] umuC PRK10276 RVT-GII Neighborhood of RT #2 [1040161, 1045047] YccC PRK10016 RVT-GII dacD Neighborhood of RT #3 [2096814, 2104212] PRK09692 Integrase_1 RVT-UG4 FimD FimC Neighborhood of RT #4 [4943380, 4946358] DinI RVT-GII PRK10276 Feature: gene Location: 843990-845255 bp Ori: AWC01227.1 Feature: domain Description: umuC Location: 843993-845253 bp Feature: domain Description: umuC Location: 843993-845253 bp Feature: gene Location: 845258-845677 bp Ori: AWC01228.1 Feature: domain Description: PRK10276 Location: 845261-845672 bp Feature: domain Description: PRK1 0276 Location: 845261 -845672 bp Feature: gene Location: 845756-847240 bp Ori: AWC01229.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846158-846848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8461 58-846848 bp Feature: gene Location: 847240-847491 bp Feature: gene Location: 847945-848274 bp Feature: gene Location: 1040161-1041219 bp Ori: AWC01414.1 Feature: domain Description: YccC Location: 1040167-1041205 bp Feature: domain Description: YccC Location: 1 0401 67-1 041 205 bp Feature: gene Location: 1041318-1041791 bp Ori: AWC01415.1 Feature: domain Description: PRK10016 Location: 1041321-1041780 bp Feature: domain Description: PRK1 001 6 Location: 1 041 321 -1 041 780 bp Feature: gene Location: 1041873-1043357 bp Ori: AWC01416.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042275-1042965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 042275-1 042965 bp Feature: gene Location: 1043357-1043608 bp Feature: gene Location: 1043878-1045047 bp Ori: AWC01418.1 Feature: domain Description: dacD Location: 1043887-1045042 bp Feature: domain Description: dacD Location: 1 043887-1 045042 bp Feature: gene Location: 2096814-2098052 bp Feature: domain Description: PRK09692 Location: 2096820-2098002 bp Feature: domain Description: PRK09692 Location: 2096820-2098002 bp Feature: gene Location: 2098232-2098687 bp Ori: AWC02373.1 Feature: domain Description: Integrase_1 Location: 2098235-2098469 bp Feature: domain Description: Integrase_1 Location: 2098235-2098469 bp Feature: gene Location: 2098729-2100810 bp Ori: AWC02374.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2099140-2099584 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 20991 40-2099584 bp Feature: gene Location: 2100807-2103401 bp Ori: AWC02375.1 Feature: domain Description: FimD Location: 2100849-2103390 bp Feature: domain Description: FimD Location: 21 00849-21 03390 bp Feature: gene Location: 2103448-2104212 bp Ori: AWC02376.1 Feature: domain Description: FimC Location: 2103493-2104195 bp Feature: domain Description: FimC Location: 21 03493-21 041 95 bp Feature: gene Location: 4943380-4943622 bp Ori: AWC04898.1 Feature: domain Description: DinI Location: 4943431-4943611 bp Feature: domain Description: DinI Location: 4943431 -494361 1 bp Feature: gene Location: 4943989-4944240 bp Feature: gene Location: 4944240-4945724 bp Ori: AWC04900.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4944642-4945332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4944642-4945332 bp Feature: gene Location: 4945802-4946041 bp Feature: gene Location: 4946041-4946358 bp Ori: AWC04902.1 Feature: domain Description: PRK10276 Location: 4946047-4946164 bp Feature: domain Description: PRK1 0276 Location: 4946047-49461 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188)
FimC (COG3121), DinI (pfam06183)

Seq: CP028931.1 Klebsiella pneumoniae strain AR_0153 plasmid unnamed3, complete sequence (70829 bp)
Overview 1 RT 1: 43567-47321 bp Neighborhood of RT #1 [43567, 47326] PRK10276 RVT-GII ArdC Feature: gene Location: 43567-43998 bp Ori: AWC00392.1 Feature: domain Description: PRK10276 Location: 43618-43981 bp Feature: domain Description: PRK102 76 Location: 43618-43981 bp Feature: gene Location: 44156-44407 bp Feature: gene Location: 44407-45891 bp Ori: AWC00394.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44809-45499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44809-45499 bp Feature: gene Location: 45884-46153 bp Feature: gene Location: 46361-47326 bp Ori: AWC00396.1 Feature: domain Description: ArdC Location: 46487-47321 bp Feature: domain Description: ArdC Location: 46487-4732 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: CP028930.1 Klebsiella pneumoniae strain AR_0153 plasmid unnamed2, complete sequence (103694 bp)
Overview 1 RT 1: 62620-65722 bp Neighborhood of RT #1 [62620, 65736] RVT-GII PRK10276 Feature: gene Location: 62620-62898 bp Feature: gene Location: 62957-63187 bp Feature: gene Location: 63421-64905 bp Ori: AWC00316.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63823-64513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 823 -64513 bp Feature: gene Location: 64905-65156 bp Feature: gene Location: 65311-65736 bp Ori: AWC00318.1 Feature: domain Description: PRK10276 Location: 65314-65722 bp Feature: domain Description: PRK10276 Location: 653 14-65722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP028929.1 Klebsiella pneumoniae strain AR_0153 plasmid unnamed1, complete sequence (283371 bp)
Overview 1 RT 1: 61384-65679 bp 2 RT 2: 200203-204063 bp Neighborhood of RT #1 [61384, 65693] cas7_csf2 RVT-GII PRK10276 Neighborhood of RT #2 [200203, 204063] HHA RVT-GII INT_Cre_C Feature: gene Location: 61384-62175 bp Ori: AWC00020.1 Feature: domain Description: cas7_csf2 Location: 61705-62119 bp Feature: domain Description: cas7_csf2 Location: 61705-62119 bp Feature: gene Location: 63450-63701 bp Feature: gene Location: 63701-65185 bp Ori: AWC00022.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64103-64793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 103-64 793 bp Feature: gene Location: 65101-65280 bp Feature: gene Location: 65271-65693 bp Ori: AWC00024.1 Feature: domain Description: PRK10276 Location: 65277-65679 bp Feature: domain Description: PRK10276 Location: 65277-65679 bp Feature: gene Location: 200203-200457 bp Ori: AWC00153.1 Feature: domain Description: HHA Location: 200254-200437 bp Feature: domain Description: HHA Location: 200254 -2004 37 bp Feature: gene Location: 200723-200974 bp Feature: gene Location: 200974-202458 bp Ori: AWC00155.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201376-202066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201376-202066 bp Feature: gene Location: 202544-203680 bp Ori: AWC00156.1 Feature: domain Description: INT_Cre_C Location: 202967-203621 bp Feature: domain Description: INT_Cre_C Location: 202967-203621 bp Feature: gene Location: 203746-204063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas7_csf2 (TIGR03115), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), HHA (pfam05321), INT_Cre_C (cd00799)