myRT

myRT report for GCA_003071425.1_ASM307142v1

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Seq: CP020484.1 Enterococcus faecium strain CFSAN059070 chromosome, complete genome (2880780 bp)
Overview 1 RT 1: 1157975-1162872 bp 2 RT 2: 1831932-1837262 bp 3 RT 3: 2755238-2760042 bp Neighborhood of RT #1 [1157975, 1162872] PRK06019 Adenylsuccinate_lyase_1 RVT-GII GIIM Neighborhood of RT #2 [1831932, 1837333] AAA_10 RVT-GII AAA_10 TcpE Neighborhood of RT #3 [2755238, 2760056] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 1157975-1159108 bp Ori: AWV58162.1 Feature: domain Description: PRK06019 Location: 1158008-1159097 bp Feature: domain Description: PRK0601 9 Location: 1 1 58008-1 1 59097 bp Feature: gene Location: 1159121-1160416 bp Ori: AWV58163.1 Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1159133-1160402 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1 1 591 33-1 1 60402 bp Feature: gene Location: 1160538-1161926 bp Ori: AWV58164.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1160859-1161474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 60859-1 1 61 474 bp Feature: domain Description: GIIM Note: maturase Location: 1161531-1161747 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 61 531 -1 1 61 747 bp Feature: gene Location: 1162294-1162482 bp Feature: gene Location: 1162495-1162872 bp Feature: gene Location: 1831932-1832771 bp Feature: domain Description: AAA_10 Location: 1831938-1832757 bp Feature: domain Description: AAA_1 0 Location: 1 831 938-1 832757 bp Feature: gene Location: 1832775-1832861 bp Feature: gene Location: 1832884-1834710 bp Ori: AWV58779.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1833184-1833883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8331 84-1 833883 bp Feature: gene Location: 1835455-1836957 bp Feature: domain Description: AAA_10 Location: 1836784-1836955 bp Feature: domain Description: AAA_1 0 Location: 1 836784-1 836955 bp Feature: gene Location: 1836944-1837333 bp Ori: AWV58780.1 Feature: domain Description: TcpE Location: 1836962-1837262 bp Feature: domain Description: TcpE Location: 1 836962-1 837262 bp Feature: gene Location: 2755238-2756422 bp Ori: AWV59636.1 Feature: domain Description: HTH_XRE Location: 2755268-2755412 bp Feature: domain Description: HTH_XRE Location: 2755268-275541 2 bp Feature: domain Description: Rol_Rep_N Location: 2755445-2755709 bp Feature: domain Description: Rol_Rep_N Location: 2755445-2755709 bp Feature: domain Description: Rep_trans Location: 2755733-2756345 bp Feature: domain Description: Rep_trans Location: 2755733-2756345 bp Feature: gene Location: 2756419-2756556 bp Ori: AWV59637.1 Feature: domain Description: DUF3789 Location: 2756446-2756539 bp Feature: domain Description: DUF3789 Location: 2756446-2756539 bp Feature: gene Location: 2757302-2759212 bp Ori: AWV59638.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757635-2758373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757635-2758373 bp Feature: domain Description: HNHc Note: nucleases Location: 2758928-2759093 bp Feature: domain Description: HNHc Note: nucleases Location: 2758928-2759093 bp Feature: gene Location: 2759316-2759540 bp Feature: gene Location: 2759553-2760056 bp Ori: AWV59640.1 Feature: domain Description: ArdA Location: 2759571-2760042 bp Feature: domain Description: ArdA Location: 2759571 -2760042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), Adenylsuccinate_lyase_1 (cd01360), RVT-GII, GIIM (pfam08388), AAA_10 (pfam12846), TcpE (pfam12648), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664)
HNHc (smart00507), ArdA (pfam07275)

Seq: CP020485.1 Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence (217014 bp)
Overview 1 RT 1: 120453-126306 bp Neighborhood of RT #1 [120453, 126425] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 120453-122147 bp Ori: AWV59943.1 Feature: domain Description: VirB4 Location: 120771-121455 bp Feature: domain Description: VirB4 Location: 12 0771-12 1455 bp Feature: gene Location: 122415-122648 bp Feature: gene Location: 122835-124712 bp Ori: AWV59945.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123150-123888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 3150-12 3888 bp Feature: domain Description: HNHc Note: nucleases Location: 124446-124599 bp Feature: domain Description: HNHc Note: nucleases Location: 12 4446-12 4599 bp Feature: gene Location: 124843-125220 bp Feature: gene Location: 125220-126425 bp Ori: AWV59946.1 Feature: domain Description: Glucosaminidase Location: 125496-125892 bp Feature: domain Description: Glucosaminidase Location: 12 5496-12 5892 bp Feature: domain Description: Peptidase_M23 Location: 126069-126306 bp Feature: domain Description: Peptidase_M2 3 Location: 12 6069-12 6306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)