myRT

myRT report for GCA_003071445.1_ASM307144v1

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Seq: CP020489.1 Enterococcus faecium strain CFSAN059071 plasmid unnamed1, complete sequence (217014 bp)
Overview 1 RT 1: 120453-126306 bp Neighborhood of RT #1 [120453, 126425] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 120453-122147 bp Ori: AWV62961.1 Feature: domain Description: VirB4 Location: 120771-121455 bp Feature: domain Description: VirB4 Location: 1 20771 -1 21 455 bp Feature: gene Location: 122415-122648 bp Feature: gene Location: 122835-124712 bp Ori: AWV62963.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123150-123888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 231 50-1 23888 bp Feature: domain Description: HNHc Note: nucleases Location: 124446-124599 bp Feature: domain Description: HNHc Note: nucleases Location: 1 24446-1 24599 bp Feature: gene Location: 124843-125220 bp Feature: gene Location: 125220-126425 bp Ori: AWV62964.1 Feature: domain Description: Glucosaminidase Location: 125496-125892 bp Feature: domain Description: Glucosaminidase Location: 1 25496-1 25892 bp Feature: domain Description: Peptidase_M23 Location: 126069-126306 bp Feature: domain Description: Peptidase_M23 Location: 1 26069-1 26306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)

Seq: CP020488.1 Enterococcus faecium strain CFSAN059071 chromosome, complete genome (2883830 bp)
Overview 1 RT 1: 1159500-1164397 bp 2 RT 2: 1833457-1838787 bp 3 RT 3: 2758287-2763091 bp Neighborhood of RT #1 [1159500, 1164397] PRK06019 Adenylsuccinate_lyase_1 RVT-GII GIIM Neighborhood of RT #2 [1833457, 1838858] AAA_10 RVT-GII AAA_10 TcpE Neighborhood of RT #3 [2758287, 2763105] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 1159500-1160633 bp Ori: AWV61179.1 Feature: domain Description: PRK06019 Location: 1159533-1160622 bp Feature: domain Description: PRK06019 Location: 1159533-116062 2 bp Feature: gene Location: 1160646-1161941 bp Ori: AWV61180.1 Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1160658-1161927 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1160658-116192 7 bp Feature: gene Location: 1162063-1163451 bp Ori: AWV61181.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1162384-1162999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1162 384-1162 999 bp Feature: domain Description: GIIM Note: maturase Location: 1163056-1163272 bp Feature: domain Description: GIIM Note: maturase Location: 1163056-11632 72 bp Feature: gene Location: 1163819-1164007 bp Feature: gene Location: 1164020-1164397 bp Feature: gene Location: 1833457-1834296 bp Feature: domain Description: AAA_10 Location: 1833463-1834282 bp Feature: domain Description: AAA_10 Location: 1833463-18342 82 bp Feature: gene Location: 1834300-1834386 bp Feature: gene Location: 1834409-1836235 bp Ori: AWV61797.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1834709-1835408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1834709-1835408 bp Feature: gene Location: 1836980-1838482 bp Feature: domain Description: AAA_10 Location: 1838309-1838480 bp Feature: domain Description: AAA_10 Location: 1838309-1838480 bp Feature: gene Location: 1838469-1838858 bp Ori: AWV61798.1 Feature: domain Description: TcpE Location: 1838487-1838787 bp Feature: domain Description: TcpE Location: 1838487-1838787 bp Feature: gene Location: 2758287-2759471 bp Ori: AWV62658.1 Feature: domain Description: HTH_XRE Location: 2758317-2758461 bp Feature: domain Description: HTH_XRE Location: 2 758317-2 758461 bp Feature: domain Description: Rol_Rep_N Location: 2758494-2758758 bp Feature: domain Description: Rol_Rep_N Location: 2 758494-2 758758 bp Feature: domain Description: Rep_trans Location: 2758782-2759394 bp Feature: domain Description: Rep_trans Location: 2 758782 -2 759394 bp Feature: gene Location: 2759468-2759605 bp Ori: AWV62659.1 Feature: domain Description: DUF3789 Location: 2759495-2759588 bp Feature: domain Description: DUF3789 Location: 2 759495-2 759588 bp Feature: gene Location: 2760351-2762261 bp Ori: AWV62660.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2760684-2761422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 760684-2 76142 2 bp Feature: domain Description: HNHc Note: nucleases Location: 2761977-2762142 bp Feature: domain Description: HNHc Note: nucleases Location: 2 761977-2 762 142 bp Feature: gene Location: 2762365-2762589 bp Feature: gene Location: 2762602-2763105 bp Ori: AWV62662.1 Feature: domain Description: ArdA Location: 2762620-2763091 bp Feature: domain Description: ArdA Location: 2 762 62 0-2 763091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), Adenylsuccinate_lyase_1 (cd01360), RVT-GII, GIIM (pfam08388), AAA_10 (pfam12846), TcpE (pfam12648), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664)
HNHc (smart00507), ArdA (pfam07275)