myRT

myRT report for GCA_003072625.1_ASM307262v1

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Seq: CP027805.1 Lactobacillus reuteri strain WHH1689 chromosome, complete genome (2044184 bp)
Overview 1 RT 1: 24843-29792 bp 2 RT 2: 58382-66471 bp 3 RT 3: 71018-76046 bp 4 RT 4: 94588-103544 bp 5 RT 5: 189653-194999 bp 6 RT 6: 211187-217230 bp 7 RT 7: 308243-311515 bp 8 RT 8: 360865-364924 bp 9 RT 9: 438710-444120 bp 10 RT 10: 554793-558634 bp 11 RT 11: 912839-923341 bp 12 RT 12: 953493-958561 bp 13 RT 13: 998109-1002996 bp 14 RT 14: 1037981-1041921 bp 15 RT 15: 1172264-1178107 bp 16 RT 16: 1354750-1360109 bp 17 RT 17: 1408101-1413542 bp 18 RT 18: 1466085-1471513 bp 19 RT 19: 1638691-1645611 bp 20 RT 20: 1661001-1665708 bp 21 RT 21: 1964024-1969207 bp Neighborhood of RT #1 [24843, 29842] DegQ PgpA RVT-GII GIIM PBP1_ABC_uncharacterized_transporter PBP1_ABC_uncharacterized_transporter Neighborhood of RT #2 [58382, 66473] HTH_LacI PBP1_ycjW_transcription_regulator_like PRK05790 RVT-GII GIIM MFS_SLC45_SUC PRK13807 Neighborhood of RT #3 [71018, 76093] GshA PRK02471 RVT-GII GIIM PuuD ARA1 Neighborhood of RT #4 [94588, 103579] trehalose_treC MFS_SLC45_SUC RVT-GII RVT-GII GIIM carB PRK12564 Neighborhood of RT #5 [189653, 195046] InsE HTH_28 HTH_28 PHA02517 RVT-GII GIIM COG4892 antiport_nhaC Neighborhood of RT #6 [211187, 217259] P-type_ATPase_HM PPM RVT-GII GIIM TMR_SDR_a Neighborhood of RT #7 [308243, 311679] lysS group_II_RT_mat RVT-GII GIIM Neighborhood of RT #8 [360865, 364950] rplA RVT-GII RVT-GII GIIM COG3464 Neighborhood of RT #9 [438710, 444120] YciA PGM2 RVT-GII GIIM HD_2 Neighborhood of RT #10 [554793, 558657] GCS_H group_II_RT_mat RVT-GII GIIM ddl Tra8 Neighborhood of RT #11 [912839, 923341] gntK_FGGY HTH_LacI PBP1_RegR_EndR_KdgR_like RVT-GII GIIM gntP gntK_FGGY Acetyltransf_1 RVT-GII GIIM group_II_RT_mat Neighborhood of RT #12 [953493, 958584] HTH_3 CitB RVT-GII GIIM COG4892 HAD_Pase Neighborhood of RT #13 [998109, 1003001] DegV RVT-GII GIIM RAYT RnaY Neighborhood of RT #14 [1037981, 1041989] InsE Nuc_deoxyrib_tr RVT-GII GIIM HAD_YbiV-Like LapA_dom Neighborhood of RT #15 [1172264, 1178115] MFS_MdtG_MDR_like ubiE RVT-GII GIIM PRK06080 Trans_IPPS_HT Neighborhood of RT #16 [1354750, 1360144] PolY_Pol_V_umuC RVT-GII GIIM ACD_LpsHSP_like ARA1 Neighborhood of RT #17 [1408101, 1413556] Tra8 Cps2a RVT-GII GIIM DUF4096 DDE_Tnp_1 DDE_Tnp_1 Neighborhood of RT #18 [1466085, 1471557] PRK07308 GtrA RVT-GII GIIM wecB SrmB Neighborhood of RT #19 [1638691, 1645637] DacC Beta-lactamase2 PenP RVT-GII GIIM sucrose_gtfA MFS_arabinose_efflux_permease_like Neighborhood of RT #20 [1661001, 1665716] PRK00701 PRK00701 RVT-GII GIIM PRK08317 TrkA Neighborhood of RT #21 [1964024, 1969242] SalY AcrR RVT-GII GIIM threonine_DH_like Tra8 Feature: gene Location: 24843-26120 bp Ori: AWD61392.1 Feature: domain Description: DegQ Location: 25020-26088 bp Feature: domain Description: DegQ Location: 25020-26088 bp Feature: gene Location: 26225-26722 bp Ori: AWD61393.1 Feature: domain Description: PgpA Location: 26285-26708 bp Feature: domain Description: PgpA Location: 26285-26708 bp Feature: gene Location: 27405-28787 bp Ori: AWD61394.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27723-28341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27723-28341 bp Feature: domain Description: GIIM Note: maturase Location: 28395-28623 bp Feature: domain Description: GIIM Note: maturase Location: 28395-28623 bp Feature: gene Location: 28941-29327 bp Ori: AWD61395.1 Feature: domain Description: PBP1_ABC_uncharacterized_transporter Location: 29037-29319 bp Feature: domain Description: PBP1 _ABC_uncharacterized_transporter Location: 29037-2931 9 bp Feature: gene Location: 29489-29842 bp Ori: AWD61396.1 Feature: domain Description: PBP1_ABC_uncharacterized_transporter Location: 29492-29792 bp Feature: domain Description: PBP1 _ABC_uncharacterized_transporter Location: 29492-29792 bp Feature: gene Location: 58382-59317 bp Ori: AWD61425.1 Gene: lacI Feature: domain Description: HTH_LacI Location: 58397-58547 bp Feature: domain Description: HTH_LacI Location: 58397-58547 bp Feature: domain Description: PBP1_ycjW_transcription_regulator_like Location: 58565-59285 bp Feature: domain Description: PBP1 _ycjW_transcription_regulator_like Location: 58565-59285 bp Feature: gene Location: 59381-60559 bp Ori: AWD61426.1 Gene: atoB Feature: domain Description: PRK05790 Location: 59384-60554 bp Feature: domain Description: PRK05790 Location: 59384-60554 bp Feature: gene Location: 61080-62462 bp Ori: AWD61427.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61398-62016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 398-6201 6 bp Feature: domain Description: GIIM Note: maturase Location: 62070-62298 bp Feature: domain Description: GIIM Note: maturase Location: 62070-62298 bp Feature: gene Location: 62781-64130 bp Ori: AWD61428.1 Gene: malY Feature: domain Description: MFS_SLC45_SUC Location: 62838-64080 bp Feature: domain Description: MFS_SLC45_SUC Location: 62838-64080 bp Feature: gene Location: 64200-66473 bp Ori: AWD61429.1 Gene: mapA Feature: domain Description: PRK13807 Location: 64224-66471 bp Feature: domain Description: PRK1 3807 Location: 64224-66471 bp Feature: gene Location: 71018-71236 bp Ori: AWD61438.1 Gene: gshA Feature: domain Description: GshA Location: 71075-71231 bp Feature: domain Description: GshA Location: 71 075-71 231 bp Feature: gene Location: 71252-72358 bp Ori: AWD61439.1 Gene: gshA Feature: domain Description: PRK02471 Location: 71258-72311 bp Feature: domain Description: PRK02471 Location: 71 258-7231 1 bp Feature: gene Location: 72866-74248 bp Ori: AWD61440.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73184-73802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 84-73802 bp Feature: domain Description: GIIM Note: maturase Location: 73856-74084 bp Feature: domain Description: GIIM Note: maturase Location: 73856-74084 bp Feature: gene Location: 74381-75109 bp Ori: AWD61441.1 Feature: domain Description: PuuD Location: 74387-75098 bp Feature: domain Description: PuuD Location: 74387-75098 bp Feature: gene Location: 75227-76093 bp Ori: AWD61442.1 Feature: domain Description: ARA1 Location: 75254-76046 bp Feature: domain Description: ARA1 Location: 75254-76046 bp Feature: gene Location: 94588-95934 bp Ori: AWD61461.1 Feature: domain Description: trehalose_treC Location: 94621-95929 bp Feature: domain Description: trehalose_treC Location: 94621 -95929 bp Feature: gene Location: 95952-97337 bp Ori: AWD61462.1 Gene: malY Feature: domain Description: MFS_SLC45_SUC Location: 96045-97290 bp Feature: domain Description: MFS_SLC45_SUC Location: 96045-97290 bp Feature: gene Location: 97860-98549 bp Ori: AWD61463.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98178-98547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981 78-98547 bp Feature: gene Location: 98559-99242 bp Ori: AWD61464.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98562-98796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98562-98796 bp Feature: domain Description: GIIM Note: maturase Location: 98850-99078 bp Feature: domain Description: GIIM Note: maturase Location: 98850-99078 bp Feature: gene Location: 99328-102498 bp Ori: AWD61465.1 Gene: carB Feature: domain Description: carB Location: 99331-102475 bp Feature: domain Description: carB Location: 99331 -1 02475 bp Feature: gene Location: 102491-103579 bp Ori: AWD61466.1 Gene: carA Feature: domain Description: PRK12564 Location: 102494-103544 bp Feature: domain Description: PRK1 2564 Location: 1 02494-1 03544 bp Feature: gene Location: 189653-190426 bp Ori: AWD61551.1 Feature: domain Description: InsE Location: 189722-189839 bp Feature: domain Description: InsE Location: 1 89722-1 89839 bp Feature: domain Description: HTH_28 Location: 189929-190061 bp Feature: domain Description: HTH_28 Location: 1 89929-1 90061 bp Feature: domain Description: HTH_28 Location: 190100-190259 bp Feature: domain Description: HTH_28 Location: 1 901 00-1 90259 bp Feature: gene Location: 190456-191274 bp Ori: AWD61552.1 Feature: domain Description: PHA02517 Location: 190480-191245 bp Feature: domain Description: PHA0251 7 Location: 1 90480-1 91 245 bp Feature: gene Location: 191790-193172 bp Ori: AWD61553.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192108-192726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 921 08-1 92726 bp Feature: domain Description: GIIM Note: maturase Location: 192780-193008 bp Feature: domain Description: GIIM Note: maturase Location: 1 92780-1 93008 bp Feature: gene Location: 193257-193490 bp Ori: AWD61554.1 Feature: domain Description: COG4892 Location: 193260-193485 bp Feature: domain Description: COG4892 Location: 1 93260-1 93485 bp Feature: gene Location: 193637-195046 bp Ori: AWD61555.1 Gene: nhaC Feature: domain Description: antiport_nhaC Location: 193691-194999 bp Feature: domain Description: antiport_nhaC Location: 1 93691 -1 94999 bp Feature: gene Location: 211187-212995 bp Ori: AWD61575.1 Feature: domain Description: P-type_ATPase_HM Location: 211214-212978 bp Feature: domain Description: P-type_ATPase_HM Location: 21 1 21 4-21 2978 bp Feature: gene Location: 213100-214290 bp Ori: AWD61576.1 Feature: domain Description: PPM Location: 213124-214234 bp Feature: domain Description: PPM Location: 21 31 24-21 4234 bp Feature: gene Location: 214776-216152 bp Ori: AWD61577.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215088-215706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 5088-21 5706 bp Feature: domain Description: GIIM Note: maturase Location: 215760-215988 bp Feature: domain Description: GIIM Note: maturase Location: 21 5760-21 5988 bp Feature: gene Location: 216239-216370 bp Feature: gene Location: 216405-217259 bp Ori: AWD61579.1 Feature: domain Description: TMR_SDR_a Location: 216414-217230 bp Feature: domain Description: TMR_SDR_a Location: 21 641 4-21 7230 bp Feature: gene Location: 308243-309760 bp Ori: AWD61676.1 Gene: lysS Feature: domain Description: lysS Location: 308261-309725 bp Feature: domain Description: lysS Location: 308261 -309725 bp Feature: gene Location: 310298-310609 bp Ori: AWD61677.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 310448-310607 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31 0448-31 0607 bp Feature: gene Location: 310657-311679 bp Ori: AWD61678.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310660-311233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 0660-31 1 233 bp Feature: domain Description: GIIM Note: maturase Location: 311287-311515 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 287-31 1 51 5 bp Feature: gene Location: 360865-361557 bp Ori: AWD61723.1 Gene: rplA Feature: domain Description: rplA Location: 360874-361552 bp Feature: domain Description: rplA Location: 360874-361 552 bp Feature: gene Location: 362058-362210 bp Feature: gene Location: 362173-362562 bp Ori: AWD61725.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362377-362542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362377-362542 bp Feature: gene Location: 362626-363222 bp Ori: AWD61726.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362629-362995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362629-362995 bp Feature: domain Description: GIIM Note: maturase Location: 363049-363220 bp Feature: domain Description: GIIM Note: maturase Location: 363049-363220 bp Feature: gene Location: 363277-363441 bp Feature: gene Location: 363664-364950 bp Ori: AWD61728.1 Feature: domain Description: COG3464 Location: 363670-364924 bp Feature: domain Description: COG3464 Location: 363670-364924 bp Feature: gene Location: 438710-439216 bp Ori: AWD61804.1 Feature: domain Description: YciA Location: 438731-439166 bp Feature: domain Description: YciA Location: 438731 -4391 66 bp Feature: gene Location: 439306-441030 bp Ori: AWD61805.1 Feature: domain Description: PGM2 Location: 439429-441004 bp Feature: domain Description: PGM2 Location: 439429-441 004 bp Feature: gene Location: 441526-442908 bp Ori: AWD61806.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441844-442462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 844-442462 bp Feature: domain Description: GIIM Note: maturase Location: 442516-442744 bp Feature: domain Description: GIIM Note: maturase Location: 44251 6-442744 bp Feature: gene Location: 443104-443742 bp Ori: AWD61807.1 Feature: domain Description: HD_2 Location: 443119-443668 bp Feature: domain Description: HD_2 Location: 4431 1 9-443668 bp Feature: gene Location: 443848-444120 bp Feature: gene Location: 554793-555086 bp Ori: AWD61925.1 Gene: gcvH Feature: domain Description: GCS_H Location: 554796-555081 bp Feature: domain Description: GCS_H Location: 554796-555081 bp Feature: gene Location: 555575-555886 bp Ori: AWD61926.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 555725-555884 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 555725-555884 bp Feature: gene Location: 555934-556956 bp Ori: AWD61927.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555937-556510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555937-55651 0 bp Feature: domain Description: GIIM Note: maturase Location: 556564-556792 bp Feature: domain Description: GIIM Note: maturase Location: 556564-556792 bp Feature: gene Location: 557129-558265 bp Ori: AWD61928.1 Feature: domain Description: ddl Location: 557138-558176 bp Feature: domain Description: ddl Location: 5571 38-5581 76 bp Feature: gene Location: 558541-558657 bp Ori: AWD61929.1 Feature: domain Description: Tra8 Location: 558550-558634 bp Feature: domain Description: Tra8 Location: 558550-558634 bp Feature: gene Location: 912839-914368 bp Ori: AWD62286.1 Gene: gntK Feature: domain Description: gntK_FGGY Location: 912848-914351 bp Feature: domain Description: gntK_FGGY Location: 91 2848-91 4351 bp Feature: gene Location: 914419-915423 bp Ori: AWD62287.1 Gene: kdgR Feature: domain Description: HTH_LacI Location: 914443-914596 bp Feature: domain Description: HTH_LacI Location: 91 4443-91 4596 bp Feature: domain Description: PBP1_RegR_EndR_KdgR_like Location: 914614-915412 bp Feature: domain Description: PBP1 _RegR_EndR_KdgR_like Location: 91 461 4-91 541 2 bp Feature: gene Location: 915557-916939 bp Ori: AWD62288.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915875-916493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 5875-91 6493 bp Feature: domain Description: GIIM Note: maturase Location: 916547-916775 bp Feature: domain Description: GIIM Note: maturase Location: 91 6547-91 6775 bp Feature: gene Location: 917428-918771 bp Ori: AWD62289.1 Feature: domain Description: gntP Location: 917431-918766 bp Feature: domain Description: gntP Location: 91 7431 -91 8766 bp Feature: gene Location: 918784-920313 bp Ori: AWD62290.1 Gene: gntK Feature: domain Description: gntK_FGGY Location: 918793-920296 bp Feature: domain Description: gntK_FGGY Location: 91 8793-920296 bp Feature: gene Location: 920541-921080 bp Ori: AWD62291.1 Feature: domain Description: Acetyltransf_1 Location: 920673-920988 bp Feature: domain Description: Acetyltransf_1 Location: 920673-920988 bp Feature: gene Location: 921156-922166 bp Ori: AWD62292.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921159-921720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921 1 59-921 720 bp Feature: domain Description: GIIM Note: maturase Location: 921774-922002 bp Feature: domain Description: GIIM Note: maturase Location: 921 774-922002 bp Feature: gene Location: 922226-922537 bp Ori: AWD62293.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 922376-922535 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 922376-922535 bp Feature: gene Location: 923030-923341 bp Feature: gene Location: 953493-954383 bp Ori: AWD62332.1 Feature: domain Description: HTH_3 Location: 953520-953670 bp Feature: domain Description: HTH_3 Location: 953520-953670 bp Feature: gene Location: 954439-955092 bp Ori: AWD62333.1 Gene: nreC Feature: domain Description: CitB Location: 954448-955084 bp Feature: domain Description: CitB Location: 954448-955084 bp Feature: gene Location: 955795-957177 bp Ori: AWD62334.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956113-956731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9561 1 3-956731 bp Feature: domain Description: GIIM Note: maturase Location: 956785-957013 bp Feature: domain Description: GIIM Note: maturase Location: 956785-95701 3 bp Feature: gene Location: 957478-957714 bp Ori: AWD62335.1 Feature: domain Description: COG4892 Location: 957490-957709 bp Feature: domain Description: COG4892 Location: 957490-957709 bp Feature: gene Location: 957772-958584 bp Ori: AWD62336.1 Feature: domain Description: HAD_Pase Location: 957787-958561 bp Feature: domain Description: HAD_Pase Location: 957787-958561 bp Feature: gene Location: 998109-998987 bp Ori: AWD62373.1 Feature: domain Description: DegV Location: 998118-998955 bp Feature: domain Description: DegV Location: 9981 1 8-998955 bp Feature: gene Location: 998951-999625 bp Feature: gene Location: 1000118-1001500 bp Ori: AWD62375.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000436-1001054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 000436-1 001 054 bp Feature: domain Description: GIIM Note: maturase Location: 1001108-1001336 bp Feature: domain Description: GIIM Note: maturase Location: 1 001 1 08-1 001 336 bp Feature: gene Location: 1001925-1002209 bp Ori: AWD62376.1 Feature: domain Description: RAYT Location: 1001928-1002150 bp Feature: domain Description: RAYT Location: 1 001 928-1 0021 50 bp Feature: gene Location: 1002345-1003001 bp Ori: AWD62377.1 Feature: domain Description: RnaY Location: 1002360-1002996 bp Feature: domain Description: RnaY Location: 1 002360-1 002996 bp Feature: gene Location: 1037981-1038268 bp Ori: AWD62417.1 Feature: domain Description: InsE Location: 1037993-1038242 bp Feature: domain Description: InsE Location: 1 037993-1 038242 bp Feature: gene Location: 1038411-1038815 bp Ori: AWD62418.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 1038429-1038702 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 038429-1 038702 bp Feature: gene Location: 1038891-1040273 bp Ori: AWD62419.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039209-1039827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 039209-1 039827 bp Feature: domain Description: GIIM Note: maturase Location: 1039881-1040109 bp Feature: domain Description: GIIM Note: maturase Location: 1 039881 -1 0401 09 bp Feature: gene Location: 1040788-1041606 bp Ori: AWD62420.1 Feature: domain Description: HAD_YbiV-Like Location: 1040803-1041586 bp Feature: domain Description: HAD_YbiV-Like Location: 1 040803-1 041 586 bp Feature: gene Location: 1041627-1041989 bp Ori: AWD62421.1 Feature: domain Description: LapA_dom Location: 1041699-1041921 bp Feature: domain Description: LapA_dom Location: 1 041 699-1 041 921 bp Feature: gene Location: 1172264-1173487 bp Ori: AWD62561.1 Gene: mdtG Feature: domain Description: MFS_MdtG_MDR_like Location: 1172327-1173455 bp Feature: domain Description: MFS_MdtG_MDR_like Location: 1 1 72327-1 1 73455 bp Feature: gene Location: 1173508-1174215 bp Ori: AWD62562.1 Gene: ubiE Feature: domain Description: ubiE Location: 1173532-1174207 bp Feature: domain Description: ubiE Location: 1 1 73532-1 1 74207 bp Feature: gene Location: 1174291-1175673 bp Ori: AWD62563.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1174609-1175227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 74609-1 1 75227 bp Feature: domain Description: GIIM Note: maturase Location: 1175284-1175509 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 75284-1 1 75509 bp Feature: gene Location: 1176155-1177054 bp Ori: AWD62564.1 Gene: menA Feature: domain Description: PRK06080 Location: 1176161-1177052 bp Feature: domain Description: PRK06080 Location: 1 1 761 61 -1 1 77052 bp Feature: gene Location: 1177135-1178115 bp Ori: AWD62565.1 Gene: hepS Feature: domain Description: Trans_IPPS_HT Location: 1177228-1178107 bp Feature: domain Description: Trans_IPPS_HT Location: 1 1 77228-1 1 781 07 bp Feature: gene Location: 1354750-1355193 bp Feature: gene Location: 1355193-1356695 bp Ori: AWD62763.1 Gene: umuC Feature: domain Description: PolY_Pol_V_umuC Location: 1355214-1356453 bp Feature: domain Description: PolY_Pol_V_umuC Location: 1 35521 4-1 356453 bp Feature: gene Location: 1356851-1358233 bp Ori: AWD62764.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1357169-1357787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3571 69-1 357787 bp Feature: domain Description: GIIM Note: maturase Location: 1357841-1358069 bp Feature: domain Description: GIIM Note: maturase Location: 1 357841 -1 358069 bp Feature: gene Location: 1358732-1359163 bp Ori: AWD62765.1 Feature: domain Description: ACD_LpsHSP_like Location: 1358843-1359119 bp Feature: domain Description: ACD_LpsHSP_like Location: 1 358843-1 3591 1 9 bp Feature: gene Location: 1359296-1360144 bp Ori: AWD62766.1 Feature: domain Description: ARA1 Location: 1359308-1360109 bp Feature: domain Description: ARA1 Location: 1 359308-1 3601 09 bp Feature: gene Location: 1408101-1409069 bp Ori: AWD62815.1 Feature: domain Description: Tra8 Location: 1408104-1409046 bp Feature: domain Description: Tra8 Location: 1 4081 04-1 409046 bp Feature: gene Location: 1409267-1410721 bp Ori: AWD62816.1 Feature: domain Description: Cps2a Location: 1409474-1410374 bp Feature: domain Description: Cps2a Location: 1 409474-1 41 0374 bp Feature: gene Location: 1410836-1412218 bp Ori: AWD62817.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1411154-1411772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 1 1 54-1 41 1 772 bp Feature: domain Description: GIIM Note: maturase Location: 1411826-1412054 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 1 826-1 41 2054 bp Feature: gene Location: 1412781-1413152 bp Ori: AWD62818.1 Feature: domain Description: DUF4096 Location: 1412808-1413024 bp Feature: domain Description: DUF4096 Location: 1 41 2808-1 41 3024 bp Feature: gene Location: 1413125-1413556 bp Ori: AWD62819.1 Feature: domain Description: DDE_Tnp_1 Location: 1413170-1413398 bp Feature: domain Description: DDE_Tnp_1 Location: 1 41 31 70-1 41 3398 bp Feature: domain Description: DDE_Tnp_1 Location: 1413440-1413542 bp Feature: domain Description: DDE_Tnp_1 Location: 1 41 3440-1 41 3542 bp Feature: gene Location: 1466085-1466543 bp Ori: AWD62875.1 Feature: domain Description: PRK07308 Location: 1466088-1466523 bp Feature: domain Description: PRK07308 Location: 1 466088-1 466523 bp Feature: gene Location: 1466536-1466979 bp Ori: AWD62876.1 Feature: domain Description: GtrA Location: 1466563-1466950 bp Feature: domain Description: GtrA Location: 1 466563-1 466950 bp Feature: gene Location: 1467055-1468437 bp Ori: AWD62877.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1467373-1467991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 467373-1 467991 bp Feature: domain Description: GIIM Note: maturase Location: 1468045-1468273 bp Feature: domain Description: GIIM Note: maturase Location: 1 468045-1 468273 bp Feature: gene Location: 1468923-1470044 bp Ori: AWD62878.1 Gene: wecB Feature: domain Description: wecB Location: 1468941-1470027 bp Feature: domain Description: wecB Location: 1 468941 -1 470027 bp Feature: gene Location: 1470256-1471557 bp Ori: AWD62879.1 Feature: domain Description: SrmB Location: 1470274-1471513 bp Feature: domain Description: SrmB Location: 1 470274-1 471 51 3 bp Feature: gene Location: 1638691-1639944 bp Ori: AWD63074.1 Gene: dacC Feature: domain Description: DacC Location: 1638736-1639942 bp Feature: domain Description: DacC Location: 1 638736-1 639942 bp Feature: gene Location: 1640129-1640926 bp Ori: AWD63075.1 Feature: domain Description: Beta-lactamase2 Location: 1640342-1640399 bp Feature: domain Description: Beta-lactamase2 Location: 1 640342-1 640399 bp Feature: domain Description: PenP Location: 1640435-1640573 bp Feature: domain Description: PenP Location: 1 640435-1 640573 bp Feature: gene Location: 1641435-1642811 bp Ori: AWD63076.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1641747-1642365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 641 747-1 642365 bp Feature: domain Description: GIIM Note: maturase Location: 1642419-1642647 bp Feature: domain Description: GIIM Note: maturase Location: 1 64241 9-1 642647 bp Feature: gene Location: 1642936-1644393 bp Ori: AWD63077.1 Feature: domain Description: sucrose_gtfA Location: 1642951-1644367 bp Feature: domain Description: sucrose_gtfA Location: 1 642951 -1 644367 bp Feature: gene Location: 1644420-1645637 bp Ori: AWD63078.1 Feature: domain Description: MFS_arabinose_efflux_permease_like Location: 1644462-1645611 bp Feature: domain Description: MFS_arabinose_efflux_permease_like Location: 1 644462-1 64561 1 bp Feature: gene Location: 1661001-1661765 bp Ori: AWD63095.1 Feature: domain Description: PRK00701 Location: 1661010-1661763 bp Feature: domain Description: PRK00701 Location: 1 661 01 0-1 661 763 bp Feature: gene Location: 1661919-1662239 bp Ori: AWD63096.1 Feature: domain Description: PRK00701 Location: 1661922-1662234 bp Feature: domain Description: PRK00701 Location: 1 661 922-1 662234 bp Feature: gene Location: 1662608-1663990 bp Ori: AWD63097.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1662926-1663544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 662926-1 663544 bp Feature: domain Description: GIIM Note: maturase Location: 1663598-1663826 bp Feature: domain Description: GIIM Note: maturase Location: 1 663598-1 663826 bp Feature: gene Location: 1664484-1665020 bp Ori: AWD63098.1 Feature: domain Description: PRK08317 Location: 1664598-1664916 bp Feature: domain Description: PRK0831 7 Location: 1 664598-1 66491 6 bp Feature: gene Location: 1665048-1665716 bp Ori: AWD63099.1 Gene: trkA Feature: domain Description: TrkA Location: 1665069-1665708 bp Feature: domain Description: TrkA Location: 1 665069-1 665708 bp Feature: gene Location: 1964024-1965082 bp Ori: AWD63426.1 Feature: domain Description: SalY Location: 1964060-1965080 bp Feature: domain Description: SalY Location: 1 964060-1 965080 bp Feature: gene Location: 1965093-1965605 bp Ori: AWD63427.1 Feature: domain Description: AcrR Location: 1965126-1965450 bp Feature: domain Description: AcrR Location: 1 9651 26-1 965450 bp Feature: gene Location: 1965882-1967264 bp Ori: AWD63428.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1966200-1966818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 966200-1 96681 8 bp Feature: domain Description: GIIM Note: maturase Location: 1966872-1967100 bp Feature: domain Description: GIIM Note: maturase Location: 1 966872-1 9671 00 bp Feature: gene Location: 1967777-1968358 bp Ori: AWD63429.1 Feature: domain Description: threonine_DH_like Location: 1967780-1968338 bp Feature: domain Description: threonine_DH_like Location: 1 967780-1 968338 bp Feature: gene Location: 1968868-1969242 bp Ori: AWD63430.1 Feature: domain Description: Tra8 Location: 1968871-1969207 bp Feature: domain Description: Tra8 Location: 1 968871 -1 969207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), PgpA (pfam04608), RVT-GII, GIIM (pfam08388), PBP1_ABC_uncharacterized_transporter, HTH_LacI (cd01392), PBP1_ycjW_transcription_regulator_like, PRK05790 (putative acyltransferase; Provisional), MFS_SLC45_SUC (cd17313), PRK13807 (maltose phosphorylase; Provisional)
GshA (pfam08886), PRK02471 (bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB), PuuD (COG2071), ARA1 (COG0656), trehalose_treC (TIGR02403), carB (PRK12815), PRK12564 (carbamoyl-phosphate synthase small subunit), InsE (COG2963), HTH_28 (pfam13518), PHA02517 (putative transposase OrfB; Reviewed)
COG4892 (Predicted heme/steroid binding protein ), antiport_nhaC (TIGR00931), P-type_ATPase_HM (cd07553), PPM (cd16009), TMR_SDR_a (cd05269), lysS (PRK02983), group_II_RT_mat (TIGR04416), rplA (PRK05424), COG3464 (Transposase ), YciA (COG1607)
PGM2 (cd05799), HD_2 (pfam12917), GCS_H (cd06848), ddl (PRK01966), Tra8 (COG2826), gntK_FGGY (TIGR01314), PBP1_RegR_EndR_KdgR_like, gntP (TIGR00791), Acetyltransf_1 (pfam00583), HTH_3 (pfam01381)
CitB (TIGR02484), HAD_Pase (cd16418), DegV (TIGR00762), RAYT (COG1943), RnaY (COG1418), Nuc_deoxyrib_tr (pfam05014), HAD_YbiV-Like (cd07518), LapA_dom (pfam06305), MFS_MdtG_MDR_like (cd17391), ubiE (PRK00216)
PRK06080 (1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated), Trans_IPPS_HT (cd00685), PolY_Pol_V_umuC (cd01700), ACD_LpsHSP_like (cd06471), Cps2a (COG1316), DUF4096 (pfam13340), DDE_Tnp_1 (pfam01609), PRK07308 (flavodoxin; Validated), GtrA (pfam04138), wecB (TIGR00236)
SrmB (COG0513), DacC (COG1686), Beta-lactamase2 (pfam13354), PenP (COG2367), sucrose_gtfA (TIGR03852), MFS_arabinose_efflux_permease_like (cd17473), PRK00701 (divalent metal cation transporter MntH), PRK08317 (hypothetical protein; Provisional), TrkA (COG0569), SalY (COG0577)
AcrR (COG1309), threonine_DH_like (cd08234)