myRT

myRT report for GCA_003073315.1_ASM307331v1

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Seq: CP028991.1 Klebsiella pneumoniae strain AR_0142 plasmid unnamed1, complete sequence (85698 bp)
Overview 1 RT 1: 44111-47600 bp Neighborhood of RT #1 [44111, 47600] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 44111-44799 bp Feature: domain Description: InsE Location: 44120-44405 bp Feature: domain Description: InsE Location: 441 20-44405 bp Feature: gene Location: 44726-45163 bp Feature: gene Location: 45457-46980 bp Ori: AWD98891.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45730-46462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45730-46462 bp Feature: domain Description: GIIM Note: maturase Location: 46537-46735 bp Feature: domain Description: GIIM Note: maturase Location: 46537-46735 bp Feature: gene Location: 47061-47240 bp Feature: domain Description: PHA02517 Location: 47064-47241 bp Feature: domain Description: PHA0251 7 Location: 47064-47241 bp Feature: gene Location: 47388-47600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP028990.1 Klebsiella pneumoniae strain AR_0142 chromosome, complete genome (5275382 bp)
Overview 1 RT 1: 1149403-1152868 bp 2 RT 2: 1965196-1972137 bp 3 RT 3: 3603162-3607020 bp Neighborhood of RT #1 [1149403, 1153277] Acetyltransf_10 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [1965196, 1972454] RVT-Retrons Phage_GPA PAPS_reductase Neighborhood of RT #3 [3603162, 3607553] InsE RVT-GII GIIM PHA02517 DDE_Tnp_1_5 Feature: gene Location: 1149403-1149858 bp Ori: AWD94844.1 Feature: domain Description: Acetyltransf_10 Location: 1149493-1149808 bp Feature: domain Description: Acetyltransf_10 Location: 1149493-1149808 bp Feature: gene Location: 1149860-1150336 bp Feature: domain Description: PHA02517 Location: 1149863-1150328 bp Feature: domain Description: PHA02 517 Location: 1149863-115032 8 bp Feature: gene Location: 1150417-1151940 bp Ori: AWD94845.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1150690-1151422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1150690-115142 2 bp Feature: domain Description: GIIM Note: maturase Location: 1151497-1151695 bp Feature: domain Description: GIIM Note: maturase Location: 1151497-1151695 bp Feature: gene Location: 1152234-1152605 bp Feature: gene Location: 1152598-1153277 bp Feature: domain Description: InsE Location: 1152610-1152868 bp Feature: domain Description: InsE Location: 1152 610-1152 868 bp Feature: gene Location: 1965196-1966020 bp Feature: gene Location: 1966390-1966749 bp Feature: gene Location: 1966999-1968738 bp Ori: AWD95598.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1967143-1967764 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1967143-1967764 bp Feature: gene Location: 1969414-1971441 bp Feature: domain Description: Phage_GPA Location: 1969948-1970911 bp Feature: domain Description: Phage_GPA Location: 1969948-1970911 bp Feature: gene Location: 1971438-1972454 bp Ori: AWD95599.1 Feature: domain Description: PAPS_reductase Location: 1971492-1972137 bp Feature: domain Description: PAPS_reductase Location: 1971492 -1972 137 bp Feature: gene Location: 3603162-3603841 bp Feature: domain Description: InsE Location: 3603174-3603432 bp Feature: domain Description: InsE Location: 3603174-3603432 bp Feature: gene Location: 3603834-3604205 bp Feature: gene Location: 3604499-3606022 bp Ori: AWD97062.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3604772-3605504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3604772 -3605504 bp Feature: domain Description: GIIM Note: maturase Location: 3605579-3605777 bp Feature: domain Description: GIIM Note: maturase Location: 3605579-3605777 bp Feature: gene Location: 3606103-3606588 bp Feature: domain Description: PHA02517 Location: 3606106-3606571 bp Feature: domain Description: PHA02 517 Location: 3606106-3606571 bp Feature: gene Location: 3606630-3607553 bp Ori: AWD97063.1 Feature: domain Description: DDE_Tnp_1_5 Location: 3606687-3607020 bp Feature: domain Description: DDE_Tnp_1_5 Location: 3606687-360702 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), RVT-Retrons, Phage_GPA (pfam05840), PAPS_reductase (TIGR02057), DDE_Tnp_1_5 (pfam13737)

Seq: CP028993.1 Klebsiella pneumoniae strain AR_0142 plasmid unnamed3, complete sequence (49476 bp)
Overview 1 RT 1: 29305-33047 bp Neighborhood of RT #1 [29305, 33064] ArdC RVT-GII PRK10276 Feature: gene Location: 29305-30270 bp Ori: AWD99024.1 Feature: domain Description: ArdC Location: 29431-30265 bp Feature: domain Description: ArdC Location: 2943 1-3 0265 bp Feature: gene Location: 30478-30747 bp Feature: gene Location: 30740-32224 bp Ori: AWD99026.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31142-31832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1142-3 183 2 bp Feature: gene Location: 32224-32475 bp Feature: gene Location: 32633-33064 bp Ori: AWD99028.1 Feature: domain Description: PRK10276 Location: 32684-33047 bp Feature: domain Description: PRK10276 Location: 3 2684-3 3 047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)