myRT

myRT report for GCA_003073495.1_ASM307349v1

Download annotations/find similar RTs

Seq: CP029036.1 Salmonella enterica subsp. enterica serovar Senftenberg str. 361154004 chromosome, complete genome (4794849 bp)
Overview 1 RT 1: 4784891-4789159 bp Neighborhood of RT #1 [4784891, 4789159] PRK10473 RVT-Retrons Feature: gene Location: 4784891-4786078 bp Ori: AWE40886.1 Feature: domain Description: PRK10473 Location: 4784894-4786070 bp Feature: domain Description: PRK1 0473 Location: 4784894-4786070 bp Feature: gene Location: 4786416-4786625 bp Feature: gene Location: 4786972-4787841 bp Ori: AWE41086.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4787017-4787602 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 478701 7-4787602 bp Feature: gene Location: 4787907-4788869 bp Feature: gene Location: 4788932-4789159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: CP029037.1 Salmonella enterica subsp. enterica serovar Senftenberg str. 361154004 plasmid unnamed, complete sequence (319930 bp)
Overview 1 RT 1: 128017-132937 bp Neighborhood of RT #1 [128017, 132960] InsE RVT-GII GIIM PHA02517 GAF_3 PRK09776 PRK09776 Feature: gene Location: 128017-128696 bp Feature: domain Description: InsE Location: 128029-128287 bp Feature: domain Description: InsE Location: 12 802 9-12 82 87 bp Feature: gene Location: 128650-129060 bp Feature: gene Location: 129354-130877 bp Ori: AWE41210.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129627-130359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 962 7-130359 bp Feature: domain Description: GIIM Note: maturase Location: 130434-130632 bp Feature: domain Description: GIIM Note: maturase Location: 130434-130632 bp Feature: gene Location: 130958-131434 bp Feature: domain Description: PHA02517 Location: 130961-131426 bp Feature: domain Description: PHA02 517 Location: 130961-13142 6 bp Feature: gene Location: 131491-132960 bp Ori: AWE41408.1 Feature: domain Description: GAF_3 Location: 131563-131977 bp Feature: domain Description: GAF_3 Location: 131563-131977 bp Feature: domain Description: PRK09776 Location: 132055-132421 bp Feature: domain Description: PRK09776 Location: 132 055-132 42 1 bp Feature: domain Description: PRK09776 Location: 132445-132937 bp Feature: domain Description: PRK09776 Location: 132 445-132 937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), GAF_3 (pfam13492), PRK09776 (putative diguanylate cyclase; Provisional)