myRT

myRT report for GCA_003073515.1_ASM307351v1

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Seq: CP029041.1 Salmonella enterica strain CFSAN051295 chromosome, complete genome (4914635 bp)
Overview 1 RT 1: 4314891-4323854 bp Neighborhood of RT #1 [4314891, 4323859] DUF4156 RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 4314891-4315244 bp Ori: AWE47564.1 Feature: domain Description: DUF4156 Location: 4314960-4315236 bp Feature: domain Description: DUF41 56 Location: 431 4960-431 5236 bp Feature: gene Location: 4315604-4315852 bp Feature: gene Location: 4315880-4317535 bp Gene: ltrA Feature: domain Description: RVT_N Location: 4315931-4316174 bp Feature: domain Description: RVT_N Location: 431 5931 -431 61 74 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4316219-4316864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 621 9-431 6864 bp Feature: domain Description: GIIM Note: maturase Location: 4316918-4317149 bp Feature: domain Description: GIIM Note: maturase Location: 431 691 8-431 71 49 bp Feature: domain Description: HNHc Note: nucleases Location: 4317362-4317521 bp Feature: domain Description: HNHc Note: nucleases Location: 431 7362-431 7521 bp Feature: gene Location: 4318764-4319057 bp Feature: gene Location: 4319104-4320780 bp Ori: AWE47567.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4319167-4319401 bp Feature: domain Description: RVT_N Location: 431 91 67-431 9401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4319455-4320100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 9455-43201 00 bp Feature: domain Description: GIIM Note: maturase Location: 4320154-4320385 bp Feature: domain Description: GIIM Note: maturase Location: 43201 54-4320385 bp Feature: domain Description: HNHc Note: nucleases Location: 4320595-4320751 bp Feature: domain Description: HNHc Note: nucleases Location: 4320595-4320751 bp Feature: gene Location: 4321876-4323522 bp Ori: AWE47568.1 Gene: groL Feature: domain Description: groEL Location: 4321882-4323508 bp Feature: domain Description: groEL Location: 4321 882-4323508 bp Feature: gene Location: 4323566-4323859 bp Ori: AWE47569.1 Gene: groES Feature: domain Description: groES Location: 4323569-4323854 bp Feature: domain Description: groES Location: 4323569-4323854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)