myRT

myRT report for GCA_003073615.1_ASM307361v1

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Seq: CP029089.1 Pseudomonas aeruginosa strain AR444 chromosome, complete genome (6853499 bp)
Overview 1 RT 1: 6401628-6411934 bp Neighborhood of RT #1 [6401628, 6411936] COG3177 RVT-GII YkfC HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 6401628-6402749 bp Ori: AWE77979.1 Feature: domain Description: COG3177 Location: 6401646-6402738 bp Feature: domain Description: COG31 77 Location: 6401 646-6402738 bp Feature: gene Location: 6403008-6403145 bp Feature: gene Location: 6403473-6404756 bp Ori: AWE76092.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6403476-6404052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6403476-6404052 bp Feature: domain Description: YkfC Location: 6404262-6404355 bp Feature: domain Description: YkfC Location: 6404262-6404355 bp Feature: domain Description: HNH Note: nucleases Location: 6404589-6404727 bp Feature: domain Description: HNH Note: nucleases Location: 6404589-6404727 bp Feature: gene Location: 6406239-6409976 bp Ori: AWE78240.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 6406347-6407004 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 6406347-6407004 bp Feature: domain Description: PRK09776 Location: 6407217-6407688 bp Feature: domain Description: PRK09776 Location: 640721 7-6407688 bp Feature: domain Description: PAS Location: 6407760-6408270 bp Feature: domain Description: PAS Location: 6407760-6408270 bp Feature: domain Description: PRK10060 Location: 6408279-6409926 bp Feature: domain Description: PRK1 0060 Location: 6408279-6409926 bp Feature: gene Location: 6410083-6411936 bp Ori: AWE76095.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 6410095-6411934 bp Feature: domain Description: PRK05658 Location: 641 0095-641 1 934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT-GII, YkfC (COG3344), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)