myRT

myRT report for GCA_003073675.1_ASM307367v1

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Seq: CP029101.1 Klebsiella pneumoniae strain AR438 plasmid unnamed3, complete sequence (208035 bp)
Overview 1 RT 1: 16112-21103 bp Neighborhood of RT #1 [16112, 21108] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 16112-16537 bp Ori: AWF08753.1 Feature: domain Description: Antirestrict Location: 16247-16535 bp Feature: domain Description: Antirestrict Location: 1 6247-1 6535 bp Feature: gene Location: 17058-17288 bp Feature: gene Location: 17522-19006 bp Ori: AWF08761.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17924-18614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7924-1 861 4 bp Feature: gene Location: 19412-19837 bp Ori: AWF08719.1 Feature: domain Description: PRK10276 Location: 19415-19823 bp Feature: domain Description: PRK1 0276 Location: 1 941 5-1 9823 bp Feature: gene Location: 19837-21108 bp Ori: AWF08878.1 Feature: domain Description: umuC Location: 19840-21103 bp Feature: domain Description: umuC Location: 1 9840-21 1 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP029099.1 Klebsiella pneumoniae strain AR438 chromosome, complete genome (5439007 bp)
Overview 1 RT 1: 1851664-1858135 bp 2 RT 2: 3093353-3099164 bp 3 RT 3: 3279628-3284992 bp 4 RT 4: 3621966-3627520 bp 5 RT 5: 4064825-4070030 bp Neighborhood of RT #1 [1851664, 1858149] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3093353, 3099220] umuC PRK10276 RVT-GII PinE Rve Neighborhood of RT #3 [3279628, 3285045] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [3621966, 3627540] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #5 [4064825, 4070086] PRK15036 RVT-GII Laminin_G_3 Feature: gene Location: 1851664-1853088 bp Ori: AWF07454.1 Gene: sbcB Feature: domain Description: SbcB Location: 1851670-1853086 bp Feature: domain Description: SbcB Location: 1851670-1853086 bp Feature: gene Location: 1853269-1854432 bp Ori: AWF05043.1 Gene: dacD Feature: domain Description: dacD Location: 1853272-1854427 bp Feature: domain Description: dacD Location: 18532 72 -185442 7 bp Feature: gene Location: 1854953-1856437 bp Ori: AWF07469.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1855355-1856045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1855355-1856045 bp Feature: gene Location: 1856519-1856992 bp Ori: AWF06243.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1856522-1856981 bp Feature: domain Description: PRK10016 Location: 185652 2 -1856981 bp Feature: gene Location: 1857091-1858149 bp Ori: AWF05474.1 Gene: yeeA Feature: domain Description: YccC Location: 1857097-1858135 bp Feature: domain Description: YccC Location: 1857097-1858135 bp Feature: gene Location: 3093353-3094618 bp Ori: AWF03323.1 Feature: domain Description: umuC Location: 3093356-3094616 bp Feature: domain Description: umuC Location: 3093356-3094616 bp Feature: gene Location: 3094620-3095039 bp Ori: AWF08009.1 Feature: domain Description: PRK10276 Location: 3094623-3095034 bp Feature: domain Description: PRK102 76 Location: 309462 3-3095034 bp Feature: gene Location: 3095119-3096603 bp Ori: AWF05609.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3095521-3096211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309552 1-30962 11 bp Feature: gene Location: 3098001-3098468 bp Ori: AWF06350.1 Gene: hin Feature: domain Description: PinE Location: 3098010-3098460 bp Feature: domain Description: PinE Location: 3098010-3098460 bp Feature: gene Location: 3098516-3099220 bp Ori: AWF03484.1 Feature: domain Description: Rve Location: 3098519-3099164 bp Feature: domain Description: Rve Location: 3098519-3099164 bp Feature: gene Location: 3279628-3280893 bp Ori: AWF08445.1 Feature: domain Description: umuC Location: 3279631-3280891 bp Feature: domain Description: umuC Location: 32 79631-32 80891 bp Feature: gene Location: 3280896-3281315 bp Ori: AWF06927.1 Feature: domain Description: PRK10276 Location: 3280899-3281310 bp Feature: domain Description: PRK102 76 Location: 32 80899-32 81310 bp Feature: gene Location: 3281394-3282878 bp Ori: AWF05744.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3281796-3282486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 81796-32 82 486 bp Feature: gene Location: 3283502-3283738 bp Ori: AWF07750.1 Feature: domain Description: DinI Location: 3283547-3283727 bp Feature: domain Description: DinI Location: 32 83547-32 8372 7 bp Feature: gene Location: 3283909-3285045 bp Ori: AWF05303.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3284089-3284992 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 32 84089-32 84992 bp Feature: gene Location: 3621966-3622844 bp Ori: AWF06772.1 Feature: domain Description: Phage_CI_repr Location: 3621993-3622176 bp Feature: domain Description: Phage_CI_repr Location: 362 1993-362 2 176 bp Feature: domain Description: Phage_CI_repr Location: 3622305-3622497 bp Feature: domain Description: Phage_CI_repr Location: 362 2 305-362 2 497 bp Feature: domain Description: Phage_CI_C Location: 3622524-3622818 bp Feature: domain Description: Phage_CI_C Location: 362 2 52 4-362 2 818 bp Feature: gene Location: 3622856-3623800 bp Feature: gene Location: 3623899-3625383 bp Ori: AWF08088.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3624301-3624991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 4301-362 4991 bp Feature: gene Location: 3625802-3626854 bp Ori: AWF07958.1 Feature: domain Description: int Location: 3625805-3626804 bp Feature: domain Description: int Location: 362 5805-362 6804 bp Feature: gene Location: 3626977-3627540 bp Ori: AWF04527.1 Feature: domain Description: YbjK Location: 3626983-3627520 bp Feature: domain Description: YbjK Location: 362 6983-362 752 0 bp Feature: gene Location: 4064825-4065226 bp Ori: AWF03592.1 Feature: domain Description: PRK15036 Location: 4064837-4065224 bp Feature: domain Description: PRK15036 Location: 4064837-40652 2 4 bp Feature: gene Location: 4066895-4067134 bp Feature: gene Location: 4067212-4068696 bp Ori: AWF03252.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4067614-4068304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4067614-4068304 bp Feature: gene Location: 4069149-4069358 bp Feature: gene Location: 4069355-4070086 bp Ori: AWF03480.1 Feature: domain Description: Laminin_G_3 Location: 4069676-4070030 bp Feature: domain Description: Laminin_G_3 Location: 4069676-4070030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), Rve (COG3316), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), PRK15036 (hydroxyisourate hydrolase; Provisional), Laminin_G_3 (pfam13385)