myRT

myRT report for GCA_003074015.1_ASM307401v1

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Seq: CP029135.1 Klebsiella pneumoniae strain AR376 plasmid unnamed1, complete sequence (70613 bp)
Overview 1 RT 1: 50139-55161 bp 2 RT 2: 65693-69608 bp Neighborhood of RT #1 [50139, 55169] ArdC RVT-GII PRK10276 umuC Neighborhood of RT #2 [65693, 69622] DDE_Tnp_IS1 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 50139-51104 bp Ori: AWF43113.1 Feature: domain Description: ArdC Location: 50265-51099 bp Feature: domain Description: ArdC Location: 50265-51 099 bp Feature: gene Location: 51236-51367 bp Feature: gene Location: 51574-53058 bp Ori: AWF43115.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51976-52666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 976-52666 bp Feature: gene Location: 53467-53898 bp Ori: AWF43116.1 Feature: domain Description: PRK10276 Location: 53518-53881 bp Feature: domain Description: PRK1 0276 Location: 5351 8-53881 bp Feature: gene Location: 53898-55169 bp Ori: AWF43117.1 Feature: domain Description: umuC Location: 53901-55161 bp Feature: domain Description: umuC Location: 53901 -551 61 bp Feature: gene Location: 65693-66070 bp Ori: AWF43131.1 Feature: domain Description: DDE_Tnp_IS1 Location: 65696-66068 bp Feature: domain Description: DDE_Tnp_IS1 Location: 65696-66068 bp Feature: gene Location: 66431-66559 bp Ori: AWF43132.1 Feature: domain Description: PHA02517 Location: 66434-66524 bp Feature: domain Description: PHA0251 7 Location: 66434-66524 bp Feature: gene Location: 66754-68262 bp Ori: AWF43133.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67012-67744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6701 2-67744 bp Feature: domain Description: GIIM Note: maturase Location: 67819-68017 bp Feature: domain Description: GIIM Note: maturase Location: 6781 9-6801 7 bp Feature: gene Location: 69350-69622 bp Ori: AWF43134.1 Feature: domain Description: InsE Location: 69359-69608 bp Feature: domain Description: InsE Location: 69359-69608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DDE_Tnp_IS1 (pfam03400), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), InsE (COG2963)

Seq: CP029136.1 Klebsiella pneumoniae strain AR376 plasmid unnamed2, complete sequence (190416 bp)
Overview 1 RT 1: 132253-137247 bp Neighborhood of RT #1 [132253, 137249] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 132253-133524 bp Ori: AWF43319.1 Feature: domain Description: umuC Location: 132256-133519 bp Feature: domain Description: umuC Location: 132 2 56-133519 bp Feature: gene Location: 133524-133949 bp Ori: AWF43159.1 Feature: domain Description: PRK10276 Location: 133527-133935 bp Feature: domain Description: PRK102 76 Location: 13352 7-133935 bp Feature: gene Location: 134355-135839 bp Ori: AWF43189.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134757-135447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134757-135447 bp Feature: gene Location: 136073-136303 bp Feature: gene Location: 136824-137249 bp Ori: AWF43283.1 Feature: domain Description: Antirestrict Location: 136959-137247 bp Feature: domain Description: Antirestrict Location: 136959-1372 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: CP029137.1 Klebsiella pneumoniae strain AR376 chromosome, complete genome (5331435 bp)
Overview 1 RT 1: 1040092-1047194 bp 2 RT 2: 2369058-2374476 bp Neighborhood of RT #1 [1040092, 1047196] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #2 [2369058, 2374478] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 1040092-1040856 bp Ori: AWF46131.1 Feature: domain Description: FimC Location: 1040137-1040839 bp Feature: domain Description: FimC Location: 104013 7-104083 9 bp Feature: gene Location: 1040903-1043497 bp Ori: AWF43773.1 Feature: domain Description: FimD Location: 1040945-1043486 bp Feature: domain Description: FimD Location: 1040945-1043 486 bp Feature: gene Location: 1043497-1045575 bp Ori: AWF45296.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1043905-1044349 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1043 905-10443 49 bp Feature: gene Location: 1045632-1046072 bp Ori: AWF46469.1 Feature: domain Description: Integrase_1 Location: 1045638-1045854 bp Feature: domain Description: Integrase_1 Location: 104563 8-1045854 bp Feature: gene Location: 1046333-1047196 bp Ori: AWF48454.1 Feature: domain Description: PRK09692 Location: 1046357-1047194 bp Feature: domain Description: PRK09692 Location: 10463 57-1047194 bp Feature: gene Location: 2369058-2370197 bp Ori: AWF48457.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2369241-2370141 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 23 69241-23 70141 bp Feature: gene Location: 2370368-2370604 bp Ori: AWF43905.1 Feature: domain Description: DinI Location: 2370413-2370593 bp Feature: domain Description: DinI Location: 23 70413 -23 70593 bp Feature: gene Location: 2371228-2372712 bp Ori: AWF47122.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2371630-2372320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 7163 0-23 723 20 bp Feature: gene Location: 2372791-2373210 bp Ori: AWF44100.1 Feature: domain Description: PRK10276 Location: 2372794-2373205 bp Feature: domain Description: PRK10276 Location: 23 72794-23 73 205 bp Feature: gene Location: 2373213-2374478 bp Ori: AWF46973.1 Feature: domain Description: umuC Location: 2373216-2374476 bp Feature: domain Description: umuC Location: 23 73 216-23 74476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)