myRT

myRT report for GCA_003076275.1_ASM307627v1

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Seq: CP029064.1 Microbulbifer sp. A4B17 chromosome, complete genome (5035829 bp)
Overview 1 RT 1: 1784386-1788665 bp 2 RT 2: 3366400-3373074 bp 3 RT 3: 3551478-3555225 bp Neighborhood of RT #1 [1784386, 1788676] RVT-GII GIIM PRK01712 Neighborhood of RT #2 [3366400, 3373085] RVT-UG8 RVT-UG3 HTH_MlrA-like_sg2 himA Neighborhood of RT #3 [3551478, 3555227] LysR RVT-GII GIIM PRK01712 Feature: gene Location: 1784386-1784763 bp Feature: gene Location: 1785472-1785771 bp Feature: gene Location: 1786481-1787779 bp Ori: AWF80773.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1786736-1787390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 786736-1 787390 bp Feature: domain Description: GIIM Note: maturase Location: 1787474-1787684 bp Feature: domain Description: GIIM Note: maturase Location: 1 787474-1 787684 bp Feature: gene Location: 1787967-1788332 bp Feature: gene Location: 1788497-1788676 bp Ori: AWF80775.1 Gene: csrA Feature: domain Description: PRK01712 Location: 1788500-1788665 bp Feature: domain Description: PRK01 71 2 Location: 1 788500-1 788665 bp Feature: gene Location: 3366400-3367023 bp Feature: gene Location: 3367510-3367833 bp Feature: gene Location: 3368814-3370781 bp Ori: AWF82008.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3369339-3369780 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3369339-3369780 bp Feature: gene Location: 3370774-3372015 bp Ori: AWF82009.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3371059-3371548 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3371 059-3371 548 bp Feature: gene Location: 3372431-3372799 bp Ori: AWF82010.1 Feature: domain Description: HTH_MlrA-like_sg2 Location: 3372488-3372761 bp Feature: domain Description: HTH_MlrA-like_sg2 Location: 3372488-3372761 bp Feature: gene Location: 3372780-3373085 bp Ori: AWF82011.1 Gene: ihfA Feature: domain Description: himA Location: 3372792-3373074 bp Feature: domain Description: himA Location: 3372792-3373074 bp Feature: gene Location: 3551478-3551657 bp Feature: gene Location: 3551670-3552551 bp Ori: AWF82148.1 Feature: domain Description: LysR Location: 3551673-3552534 bp Feature: domain Description: LysR Location: 3551 673-3552534 bp Feature: gene Location: 3553051-3554349 bp Ori: AWF82149.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3553306-3553960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3553306-3553960 bp Feature: domain Description: GIIM Note: maturase Location: 3554044-3554254 bp Feature: domain Description: GIIM Note: maturase Location: 3554044-3554254 bp Feature: gene Location: 3554537-3554782 bp Feature: gene Location: 3555063-3555227 bp Ori: AWF82151.1 Gene: csrA Feature: domain Description: PRK01712 Location: 3555066-3555225 bp Feature: domain Description: PRK01 71 2 Location: 3555066-3555225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK01712 (carbon storage regulator CsrA), RVT-UG8, RVT-UG3, HTH_MlrA-like_sg2 (cd04765), himA (TIGR00987), LysR (COG0583)