myRT

myRT report for GCA_003076455.1_ASM307645v1

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Seq: CP020918.1 Flavobacterium faecale strain WV33 chromosome, complete genome (4621116 bp)
Overview 1 RT 1: 620181-626617 bp 2 RT 2: 2340498-2350746 bp 3 RT 3: 3705924-3710456 bp 4 RT 4: 3776720-3781609 bp Neighborhood of RT #1 [620181, 626643] RVT-GII GIIM KOG2237 Neighborhood of RT #2 [2340498, 2350746] Zn_Tnp_IS91 Y2_Tnp RVT-GII GIIM YceI HxlR PRK09039 RVT-GII GIIM Neighborhood of RT #3 [3705924, 3710456] PepSY_TM COG3666 RVT-GII GIIM PIN_VapC4-5_FitB-like Neighborhood of RT #4 [3776720, 3781609] DUF4071 RVT-GII GIIM Feature: gene Location: 620181-620366 bp Feature: gene Location: 620696-621415 bp Feature: gene Location: 622127-623422 bp Ori: AWG20530.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622322-622937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622322-622937 bp Feature: domain Description: GIIM Note: maturase Location: 623009-623222 bp Feature: domain Description: GIIM Note: maturase Location: 623009-623222 bp Feature: gene Location: 624266-624460 bp Feature: gene Location: 624547-626643 bp Ori: AWG20532.1 Feature: domain Description: KOG2237 Location: 624604-626617 bp Feature: domain Description: KOG2237 Location: 624604-62661 7 bp Feature: gene Location: 2340498-2341637 bp Feature: domain Description: Zn_Tnp_IS91 Location: 2340585-2340816 bp Feature: domain Description: Zn_Tnp_IS91 Location: 2340585-234081 6 bp Feature: domain Description: Y2_Tnp Location: 2340933-2341449 bp Feature: domain Description: Y2_Tnp Location: 2340933-2341 449 bp Feature: gene Location: 2341905-2342495 bp Feature: gene Location: 2343197-2344492 bp Ori: AWG21863.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2343392-2344007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2343392-2344007 bp Feature: domain Description: GIIM Note: maturase Location: 2344079-2344292 bp Feature: domain Description: GIIM Note: maturase Location: 2344079-2344292 bp Feature: gene Location: 2344686-2345246 bp Ori: AWG21864.1 Feature: domain Description: YceI Location: 2344704-2345169 bp Feature: domain Description: YceI Location: 2344704-23451 69 bp Feature: gene Location: 2345372-2345713 bp Ori: AWG21865.1 Feature: domain Description: HxlR Location: 2345417-2345699 bp Feature: domain Description: HxlR Location: 234541 7-2345699 bp Feature: gene Location: 2345935-2347269 bp Ori: AWG21866.1 Feature: domain Description: PRK09039 Location: 2346295-2346745 bp Feature: domain Description: PRK09039 Location: 2346295-2346745 bp Feature: gene Location: 2347969-2349264 bp Ori: AWG21867.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2348164-2348779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23481 64-2348779 bp Feature: domain Description: GIIM Note: maturase Location: 2348851-2349064 bp Feature: domain Description: GIIM Note: maturase Location: 2348851 -2349064 bp Feature: gene Location: 2349366-2350187 bp Feature: gene Location: 2350192-2350746 bp Feature: gene Location: 3705924-3707006 bp Ori: AWG22832.1 Feature: domain Description: PepSY_TM Location: 3705951-3706962 bp Feature: domain Description: PepSY_TM Location: 3705951 -3706962 bp Feature: gene Location: 3707167-3707637 bp Feature: domain Description: COG3666 Location: 3707233-3707635 bp Feature: domain Description: COG3666 Location: 3707233-3707635 bp Feature: gene Location: 3708442-3709737 bp Ori: AWG22833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3708637-3709252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3708637-3709252 bp Feature: domain Description: GIIM Note: maturase Location: 3709324-3709537 bp Feature: domain Description: GIIM Note: maturase Location: 3709324-3709537 bp Feature: gene Location: 3709813-3710217 bp Ori: AWG22834.1 Feature: domain Description: PIN_VapC4-5_FitB-like Location: 3709825-3710206 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 3709825-371 0206 bp Feature: gene Location: 3710217-3710456 bp Feature: gene Location: 3776720-3777937 bp Ori: AWG22890.1 Feature: domain Description: DUF4071 Location: 3777455-3777680 bp Feature: domain Description: DUF4071 Location: 3777455-3777680 bp Feature: gene Location: 3778192-3778677 bp Feature: gene Location: 3779384-3780679 bp Ori: AWG22892.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3779579-3780194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3779579-37801 94 bp Feature: domain Description: GIIM Note: maturase Location: 3780266-3780479 bp Feature: domain Description: GIIM Note: maturase Location: 3780266-3780479 bp Feature: gene Location: 3780756-3781316 bp Feature: gene Location: 3781340-3781609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG2237 (KOG2237, Predicted serine protease ), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), YceI (smart00867), HxlR (pfam01638), PRK09039 (peptidoglycan -binding protein), PepSY_TM (pfam03929), COG3666 (Transposase )
PIN_VapC4-5_FitB-like (cd18754), DUF4071 (pfam13281)