myRT

myRT report for GCA_003100575.1_ASM310057v1

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Seq: CP029233.1 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence (418014 bp)
Overview 1 RT 1: 47536-53665 bp 2 RT 2: 168184-173050 bp Neighborhood of RT #1 [47536, 53790] COG4644 RVT-GII RVT-GII RVT-GII HTH_21 HTH_Tnp_1 Neighborhood of RT #2 [168184, 173050] fkbM_fam Y2_Tnp RVT-GII Rve Feature: gene Location: 47536-48393 bp Feature: gene Location: 48875-49204 bp Ori: AWI61764.1 Feature: domain Description: COG4644 Location: 48890-49199 bp Feature: domain Description: COG4644 Location: 48890-491 99 bp Feature: gene Location: 49571-50176 bp Ori: AWI61765.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49982-50039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49982-50039 bp Feature: gene Location: 50056-50826 bp Ori: AWI61766.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50062-50671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50062-50671 bp Feature: gene Location: 51772-52944 bp Ori: AWI61767.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51874-52564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 874-52564 bp Feature: gene Location: 53135-53440 bp Ori: AWI61768.1 Feature: domain Description: HTH_21 Location: 53186-53321 bp Feature: domain Description: HTH_21 Location: 531 86-53321 bp Feature: gene Location: 53440-53790 bp Ori: AWI61769.1 Feature: domain Description: HTH_Tnp_1 Location: 53443-53665 bp Feature: domain Description: HTH_Tnp_1 Location: 53443-53665 bp Feature: gene Location: 168184-168909 bp Ori: AWI61896.1 Feature: domain Description: fkbM_fam Location: 168331-168778 bp Feature: domain Description: fkbM_fam Location: 1 68331 -1 68778 bp Feature: gene Location: 170047-170472 bp Ori: AWI61897.1 Feature: domain Description: Y2_Tnp Location: 170185-170278 bp Feature: domain Description: Y2_Tnp Location: 1 701 85-1 70278 bp Feature: gene Location: 170548-171429 bp Ori: AWI61898.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170563-171067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 70563-1 71 067 bp Feature: gene Location: 171390-172223 bp Ori: AWI61899.1 Feature: domain Description: Rve Location: 171426-171993 bp Feature: domain Description: Rve Location: 1 71 426-1 71 993 bp Feature: gene Location: 172817-173050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4644 (Transposase and inactivated derivatives, TnpA family ), RVT-GII, HTH_21 (pfam13276), HTH_Tnp_1 (pfam01527), fkbM_fam (TIGR01444), Y2_Tnp (pfam04986), Rve (COG3316)