myRT

myRT report for GCA_003122105.1_ASM312210v1

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Seq: CP029244.1 Escherichia coli strain ECCRA-119 plasmid pTB202, complete sequence (139629 bp)
Overview 1 RT 1: 4755-9569 bp Neighborhood of RT #1 [4755, 9568] PRK11114 RVT-GII GIIM RAYT Feature: gene Location: 4755-6905 bp Ori: AWK02060.1 Feature: domain Description: PRK11114 Location: 4815-6888 bp Feature: domain Description: PRK1 1 1 1 4 Location: 481 5-6888 bp Feature: gene Location: 7245-7424 bp Feature: gene Location: 7649-8995 bp Ori: AWK02061.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7937-8555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7937-8555 bp Feature: domain Description: GIIM Note: maturase Location: 8603-8834 bp Feature: domain Description: GIIM Note: maturase Location: 8603-8834 bp Feature: gene Location: 9097-9213 bp Feature: gene Location: 9182-9568 bp Gene: tnpA Feature: domain Description: RAYT Location: 9227-9569 bp Feature: domain Description: RAYT Location: 9227-9569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB), RVT-GII, GIIM (pfam08388), RAYT (COG1943)

Seq: CP029242.1 Escherichia coli strain ECCRA-119 chromosome, complete genome (4893130 bp)
Overview 1 RT 1: 3754928-3765867 bp Neighborhood of RT #1 [3754928, 3765867] Psu RVT-UG7 PRK09692 DUF4062 HTH_XRE RVT-Retrons Resolvase Feature: gene Location: 3754928-3755500 bp Ori: AWK00687.1 Feature: domain Description: Psu Location: 3754946-3755483 bp Feature: domain Description: Psu Location: 3754946-3755483 bp Feature: gene Location: 3755803-3756543 bp Feature: gene Location: 3756540-3758168 bp Ori: AWK00689.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3756948-3757377 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3756948-3757377 bp Feature: gene Location: 3758161-3759345 bp Ori: AWK00690.1 Feature: domain Description: PRK09692 Location: 3758167-3759322 bp Feature: domain Description: PRK09692 Location: 3758167-375932 2 bp Feature: gene Location: 3760054-3761235 bp Ori: AWK00691.1 Feature: domain Description: DUF4062 Location: 3760069-3760396 bp Feature: domain Description: DUF4062 Location: 3760069-3760396 bp Feature: gene Location: 3761266-3761727 bp Ori: AWK00692.1 Feature: domain Description: HTH_XRE Location: 3761296-3761464 bp Feature: domain Description: HTH_XRE Location: 37612 96-3761464 bp Feature: gene Location: 3761967-3762464 bp Feature: gene Location: 3762601-3764307 bp Ori: AWK00693.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3762751-3763348 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3762 751-3763348 bp Feature: gene Location: 3764575-3765240 bp Ori: AWK00694.1 Feature: domain Description: Resolvase Location: 3764596-3765013 bp Feature: domain Description: Resolvase Location: 3764596-3765013 bp Feature: gene Location: 3765523-3765867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG7, PRK09692 (Integrase; provisional), DUF4062 (pfam13271), HTH_XRE (smart00530), RVT-Retrons, Resolvase (smart00857)