myRT

myRT report for GCA_003130795.1_ASM313079v1

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Seq: CP029352.1 Azospirillum sp. CFH 70021 chromosome 1, complete sequence (1351902 bp)
Overview 1 RT 1: 420704-426990 bp 2 RT 2: 475079-479256 bp Neighborhood of RT #1 [420704, 426992] pyrG RVT-GII GIIM Triacylglycerol_lipase_like Autotransporter DLH Neighborhood of RT #2 [475079, 479393] COG3737 RVT-GII GIIM SodA HpnE Feature: gene Location: 420704-422335 bp Ori: AWK85097.1 Feature: domain Description: pyrG Location: 420707-422324 bp Feature: domain Description: pyrG Location: 420707-422324 bp Feature: gene Location: 422444-422724 bp Feature: gene Location: 422784-424148 bp Ori: AWK85098.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423111-423726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4231 1 1 -423726 bp Feature: domain Description: GIIM Note: maturase Location: 423786-423990 bp Feature: domain Description: GIIM Note: maturase Location: 423786-423990 bp Feature: gene Location: 424380-426224 bp Ori: AWK85099.1 Feature: domain Description: Triacylglycerol_lipase_like Location: 424488-425292 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 424488-425292 bp Feature: domain Description: Autotransporter Location: 425421-426156 bp Feature: domain Description: Autotransporter Location: 425421 -4261 56 bp Feature: gene Location: 426297-426992 bp Ori: AWK85100.1 Feature: domain Description: DLH Location: 426303-426990 bp Feature: domain Description: DLH Location: 426303-426990 bp Feature: gene Location: 475079-475456 bp Ori: AWK85140.1 Feature: domain Description: COG3737 Location: 475112-475448 bp Feature: domain Description: COG3737 Location: 4751 1 2-475448 bp Feature: gene Location: 475591-475871 bp Feature: gene Location: 475931-477295 bp Ori: AWK85141.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476258-476873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476258-476873 bp Feature: domain Description: GIIM Note: maturase Location: 476933-477137 bp Feature: domain Description: GIIM Note: maturase Location: 476933-4771 37 bp Feature: gene Location: 477404-478000 bp Ori: AWK85142.1 Feature: domain Description: SodA Location: 477407-477995 bp Feature: domain Description: SodA Location: 477407-477995 bp Feature: gene Location: 478005-479393 bp Ori: AWK85143.1 Feature: domain Description: HpnE Location: 478071-479256 bp Feature: domain Description: HpnE Location: 478071 -479256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrG (PRK05380), RVT-GII, GIIM (pfam08388), Triacylglycerol_lipase_like (cd01847), Autotransporter (smart00869), DLH (pfam01738), COG3737 (Uncharacterized conserved protein, contains Mth938-like domain ), SodA (COG0605), HpnE (TIGR03467)

Seq: CP029357.1 Azospirillum sp. CFH 70021 plasmid unnamed2 (672413 bp)
Overview 1 RT 1: 425598-432676 bp Neighborhood of RT #1 [425598, 432732] PRK15023 Tar RVT-GII GIIM PRK10712 PRK10712 Feature: gene Location: 425598-427010 bp Ori: AWK89614.1 Feature: domain Description: PRK15023 Location: 425601-426948 bp Feature: domain Description: PRK1502 3 Location: 42 5601-42 6948 bp Feature: gene Location: 427331-428995 bp Ori: AWK89615.1 Feature: domain Description: Tar Location: 427847-428972 bp Feature: domain Description: Tar Location: 42 7847-42 8972 bp Feature: gene Location: 429121-430485 bp Ori: AWK89616.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429448-430063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 9448-430063 bp Feature: domain Description: GIIM Note: maturase Location: 430123-430327 bp Feature: domain Description: GIIM Note: maturase Location: 43012 3-43032 7 bp Feature: gene Location: 430478-430741 bp Feature: gene Location: 430951-432732 bp Ori: AWK89814.1 Feature: domain Description: PRK10712 Location: 430963-431179 bp Feature: domain Description: PRK10712 Location: 430963-431179 bp Feature: domain Description: PRK10712 Location: 431197-432676 bp Feature: domain Description: PRK10712 Location: 431197-432 676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15023 (L-serine deaminase; Provisional), Tar (COG0840), RVT-GII, GIIM (pfam08388), PRK10712 (PTS system fructose-specific transporter subunits IIBC; Provisional)

Seq: CP029356.1 Azospirillum sp. CFH 70021 plasmid unnamed1 (882608 bp)
Overview 1 RT 1: 631168-634967 bp Neighborhood of RT #1 [631168, 634967] PBP1_ABC_LIVBP_like RVT-GII GIIM Feature: gene Location: 631168-632268 bp Ori: AWK89079.1 Feature: domain Description: PBP1_ABC_LIVBP_like Location: 631249-632239 bp Feature: domain Description: PBP1_ABC_LIVBP_like Location: 63 1249-63 223 9 bp Feature: gene Location: 632395-632675 bp Feature: gene Location: 632735-634099 bp Ori: AWK89080.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633062-633677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 3 062-63 3 677 bp Feature: domain Description: GIIM Note: maturase Location: 633737-633941 bp Feature: domain Description: GIIM Note: maturase Location: 63 3 73 7-63 3 941 bp Feature: gene Location: 634233-634472 bp Feature: gene Location: 634758-634967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP1_ABC_LIVBP_like, RVT-GII, GIIM (pfam08388)

Seq: CP029353.1 Azospirillum sp. CFH 70021 chromosome 2, complete sequence (2538983 bp)
Overview 1 RT 1: 271319-276676 bp 2 RT 2: 1349421-1354893 bp 3 RT 3: 1865745-1871520 bp 4 RT 4: 2345336-2349700 bp Neighborhood of RT #1 [271319, 276690] BI-1-like_bacterial RVT-GII GIIM PRK15426 PRK10767 Neighborhood of RT #2 [1349421, 1354931] SPFH_HflC degP_htrA_DO RVT-GII GIIM hutG_amidohyd Neighborhood of RT #3 [1865745, 1871528] PRK12344 TrmJ RVT-Retrons HTH_XRE YliI Neighborhood of RT #4 [2345336, 2349702] CBS_pair_HRP1_like DUF2934 RVT-GII GIIM groEL Feature: gene Location: 271319-272041 bp Ori: AWK86082.1 Feature: domain Description: BI-1-like_bacterial Location: 271394-272027 bp Feature: domain Description: BI-1-like_bacterial Location: 271394 -272027 bp Feature: gene Location: 272156-272436 bp Feature: gene Location: 272496-273860 bp Ori: AWK86083.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272823-273438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272823-2734 38 bp Feature: domain Description: GIIM Note: maturase Location: 273498-273702 bp Feature: domain Description: GIIM Note: maturase Location: 2734 98-273702 bp Feature: gene Location: 274205-275350 bp Ori: AWK86084.1 Feature: domain Description: PRK15426 Location: 274763-275327 bp Feature: domain Description: PRK154 26 Location: 274 763-275327 bp Feature: gene Location: 275530-276690 bp Ori: AWK86085.1 Gene: dnaJ Feature: domain Description: PRK10767 Location: 275533-276676 bp Feature: domain Description: PRK10767 Location: 275533-276676 bp Feature: gene Location: 1349421-1350293 bp Ori: AWK86961.1 Gene: hflC Feature: domain Description: SPFH_HflC Location: 1349490-1350228 bp Feature: domain Description: SPFH_HflC Location: 134 94 90-1350228 bp Feature: gene Location: 1350717-1352183 bp Ori: AWK87996.1 Feature: domain Description: degP_htrA_DO Location: 1350804-1352163 bp Feature: domain Description: degP_htrA_DO Location: 1350804 -1352163 bp Feature: gene Location: 1352284-1353648 bp Ori: AWK86962.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1352611-1353226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1352611-1353226 bp Feature: domain Description: GIIM Note: maturase Location: 1353286-1353490 bp Feature: domain Description: GIIM Note: maturase Location: 1353286-13534 90 bp Feature: gene Location: 1353708-1353988 bp Feature: gene Location: 1354110-1354931 bp Ori: AWK86963.1 Gene: hutG Feature: domain Description: hutG_amidohyd Location: 1354119-1354893 bp Feature: domain Description: hutG_amidohyd Location: 1354 119-1354 893 bp Feature: gene Location: 1865745-1867349 bp Ori: AWK87370.1 Feature: domain Description: PRK12344 Location: 1865754-1867332 bp Feature: domain Description: PRK1234 4 Location: 1865754 -1867332 bp Feature: gene Location: 1867392-1868165 bp Ori: AWK87371.1 Feature: domain Description: TrmJ Location: 1867437-1868154 bp Feature: domain Description: TrmJ Location: 18674 37-1868154 bp Feature: gene Location: 1868505-1869416 bp Ori: AWK87372.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1868670-1869195 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1868670-1869195 bp Feature: gene Location: 1869385-1869711 bp Ori: AWK88040.1 Feature: domain Description: HTH_XRE Location: 1869397-1869559 bp Feature: domain Description: HTH_XRE Location: 1869397-1869559 bp Feature: gene Location: 1870293-1871528 bp Ori: AWK87373.1 Feature: domain Description: YliI Location: 1870350-1871520 bp Feature: domain Description: YliI Location: 1870350-1871520 bp Feature: gene Location: 2345336-2345770 bp Ori: AWK87743.1 Feature: domain Description: CBS_pair_HRP1_like Location: 2345357-2345696 bp Feature: domain Description: CBS_pair_HRP1_like Location: 234 5357-234 5696 bp Feature: gene Location: 2345782-2346123 bp Ori: AWK87744.1 Feature: domain Description: DUF2934 Location: 2345806-2345911 bp Feature: domain Description: DUF2934 Location: 234 5806-234 5911 bp Feature: gene Location: 2346238-2347601 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2346565-2347180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234 6565-234 7180 bp Feature: domain Description: GIIM Note: maturase Location: 2347240-2347441 bp Feature: domain Description: GIIM Note: maturase Location: 234 724 0-234 74 4 1 bp Feature: gene Location: 2347661-2347941 bp Feature: gene Location: 2348059-2349702 bp Ori: AWK87745.1 Gene: groL Feature: domain Description: groEL Location: 2348062-2349700 bp Feature: domain Description: groEL Location: 234 8062-234 9700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BI-1-like_bacterial (cd10432), RVT-GII, GIIM (pfam08388), PRK15426 (cellulose biosynthesis regulator YedQ), PRK10767 (chaperone protein DnaJ; Provisional), SPFH_HflC (cd03405), degP_htrA_DO (TIGR02037), hutG_amidohyd (TIGR02017), PRK12344 (putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional), TrmJ (COG0565)
RVT-Retrons, HTH_XRE (smart00530), YliI (COG2133), CBS_pair_HRP1_like (cd04622), DUF2934 (pfam11154), groEL (PRK12852)