myRT

myRT report for GCA_003183825.1_ASM318382v1

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Seq: CP029604.1 Gordonia terrae strain NRRL B-16283 chromosome, complete genome (5708950 bp)
Overview 1 RT 1: 2833064-2840999 bp 2 RT 2: 4521807-4527567 bp Neighborhood of RT #1 [2833064, 2841022] UvrA UvrA DUF772 DDE_Tnp_1_6 RVT-Retrons HGbI_like pimE Neighborhood of RT #2 [4521807, 4527567] AcrR DUF222 RVT-GII GIIM HNH Feature: gene Location: 2833064-2835430 bp Ori: AWO86788.1 Feature: domain Description: UvrA Location: 2833100-2833475 bp Feature: domain Description: UvrA Location: 28331 00-2833475 bp Feature: domain Description: UvrA Location: 2833550-2835422 bp Feature: domain Description: UvrA Location: 2833550-2835422 bp Feature: gene Location: 2835663-2837417 bp Ori: AWO84296.1 Feature: domain Description: DUF772 Location: 2835828-2836032 bp Feature: domain Description: DUF772 Location: 2835828-2836032 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2837199-2837385 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 28371 99-2837385 bp Feature: gene Location: 2837705-2839114 bp Ori: AWO84297.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2838278-2838881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2838278-2838881 bp Feature: gene Location: 2839227-2839673 bp Ori: AWO84298.1 Feature: domain Description: HGbI_like Location: 2839242-2839608 bp Feature: domain Description: HGbI_like Location: 2839242-2839608 bp Feature: gene Location: 2839724-2841022 bp Ori: AWO84299.1 Feature: domain Description: pimE Location: 2839787-2840999 bp Feature: domain Description: pimE Location: 2839787-2840999 bp Feature: gene Location: 4521807-4522460 bp Ori: AWO85539.1 Feature: domain Description: AcrR Location: 4521873-4522395 bp Feature: domain Description: AcrR Location: 4521 873-4522395 bp Feature: gene Location: 4522927-4524057 bp Feature: domain Description: DUF222 Location: 4523047-4523926 bp Feature: domain Description: DUF222 Location: 4523047-4523926 bp Feature: gene Location: 4524602-4526038 bp Ori: AWO85540.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4524926-4525607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4524926-4525607 bp Feature: domain Description: GIIM Note: maturase Location: 4525676-4525904 bp Feature: domain Description: GIIM Note: maturase Location: 4525676-4525904 bp Feature: gene Location: 4526144-4526350 bp Feature: domain Description: HNH Note: nucleases Location: 4526150-4526222 bp Feature: domain Description: HNH Note: nucleases Location: 45261 50-4526222 bp Feature: gene Location: 4526524-4527567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-Retrons, HGbI_like, pimE (PRK13375), AcrR (COG1309), DUF222 (pfam02720), RVT-GII, GIIM (pfam08388)
HNH (pfam01844)