myRT

myRT report for GCA_003194345.1_ASM319434v1

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Seq: CP028484.1 Escherichia coli strain E41-1 plasmid p1, complete sequence (128911 bp)
Overview 1 RT 1: 52436-56224 bp Neighborhood of RT #1 [52436, 56262] InsE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 52436-53175 bp Feature: domain Description: InsE Location: 52439-52775 bp Feature: domain Description: InsE Location: 52439-52775 bp Feature: gene Location: 53168-53539 bp Feature: gene Location: 53833-55356 bp Ori: AWR76728.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54106-54838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 06-54838 bp Feature: domain Description: GIIM Note: maturase Location: 54913-55111 bp Feature: domain Description: GIIM Note: maturase Location: 5491 3-551 1 1 bp Feature: gene Location: 55446-55829 bp Feature: domain Description: PHA02517 Location: 55452-55785 bp Feature: domain Description: PHA0251 7 Location: 55452-55785 bp Feature: gene Location: 55858-56262 bp Ori: AWR76729.1 Feature: domain Description: InsE Location: 55888-56224 bp Feature: domain Description: InsE Location: 55888-56224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP028486.1 Escherichia coli strain E41-1 plasmid p3, complete sequence (52864 bp)
Overview 1 RT 1: 11835-16088 bp Neighborhood of RT #1 [11835, 16243] MobC RVT-GII GIIM IMP_DIM-like_MBL-B1 PRK15417 Feature: gene Location: 11835-11990 bp Feature: gene Location: 11949-12215 bp Ori: AWR76929.1 Feature: domain Description: MobC Location: 12000-12120 bp Feature: domain Description: MobC Location: 12 000-12 12 0 bp Feature: gene Location: 12952-14301 bp Ori: AWR76930.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13234-13852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 34-13852 bp Feature: domain Description: GIIM Note: maturase Location: 13900-14104 bp Feature: domain Description: GIIM Note: maturase Location: 13900-14104 bp Feature: gene Location: 14391-15131 bp Ori: AWR76931.1 Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 14463-15084 bp Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 14463-15084 bp Feature: gene Location: 15284-16243 bp Ori: AWR76932.1 Feature: domain Description: PRK15417 Location: 15287-16088 bp Feature: domain Description: PRK15417 Location: 152 87-16088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), RVT-GII, GIIM (pfam08388), IMP_DIM-like_MBL-B1 (cd16301), PRK15417 (integron integrase)

Seq: CP028483.1 Escherichia coli strain E41-1 chromosome, complete genome (5022609 bp)
Overview 1 RT 1: 2802180-2807078 bp Neighborhood of RT #1 [2802180, 2807078] RVT-Retrons Feature: gene Location: 2802180-2802695 bp Feature: gene Location: 2802692-2803819 bp Feature: gene Location: 2804066-2805823 bp Ori: AWR74371.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2804210-2804828 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2804210-2804828 bp Feature: gene Location: 2806394-2806633 bp Feature: gene Location: 2806848-2807078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons