myRT

myRT report for GCA_003203435.1_ASM320343v1

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Seq: CP023722.1 Klebsiella pneumoniae strain TVGHCRE225 chromosome, complete genome (5547427 bp)
Overview 1 RT 1: 2427680-2430929 bp 2 RT 2: 2751962-2758370 bp 3 RT 3: 2827092-2831200 bp 4 RT 4: 2977713-2983590 bp 5 RT 5: 4256409-4261290 bp 6 RT 6: 4710604-4714662 bp 7 RT 7: 4873194-4877230 bp Neighborhood of RT #1 [2427680, 2431321] YbjK int RVT-GII Neighborhood of RT #2 [2751962, 2758370] AbiH PRK05318 RVT-GII PRK10597 Neighborhood of RT #3 [2827092, 2831202] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2977713, 2983592] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [4256409, 4261295] YccC PRK10016 RVT-GII dacD Neighborhood of RT #6 [4710604, 4714662] Terminase_2 RVT-GII Neighborhood of RT #7 [4873194, 4878084] DinI RVT-GII Phage_GPA Feature: gene Location: 2427680-2428243 bp Feature: domain Description: YbjK Location: 2427686-2428223 bp Feature: domain Description: YbjK Location: 2427686-2428223 bp Feature: gene Location: 2428366-2429418 bp Feature: domain Description: int Location: 2428369-2429368 bp Feature: domain Description: int Location: 2428369-2429368 bp Feature: gene Location: 2429834-2431321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2430239-2430929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2430239-2430929 bp Feature: gene Location: 2751962-2752831 bp Feature: domain Description: AbiH Location: 2751971-2752739 bp Feature: domain Description: AbiH Location: 2751 971 -2752739 bp Feature: gene Location: 2754070-2755431 bp Feature: domain Description: PRK05318 Location: 2754094-2755393 bp Feature: domain Description: PRK0531 8 Location: 2754094-2755393 bp Feature: gene Location: 2756269-2757756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2756674-2757364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2756674-2757364 bp Feature: gene Location: 2757835-2758068 bp Feature: domain Description: PRK10597 Location: 2757838-2758063 bp Feature: domain Description: PRK1 0597 Location: 2757838-2758063 bp Feature: gene Location: 2758113-2758370 bp Feature: gene Location: 2827092-2827334 bp Feature: domain Description: DinI Location: 2827143-2827323 bp Feature: domain Description: DinI Location: 28271 43-2827323 bp Feature: gene Location: 2827349-2827495 bp Feature: gene Location: 2827949-2829436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2828354-2829044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2828354-2829044 bp Feature: gene Location: 2829515-2829934 bp Feature: domain Description: PRK10276 Location: 2829518-2829929 bp Feature: domain Description: PRK1 0276 Location: 282951 8-2829929 bp Feature: gene Location: 2829937-2831202 bp Feature: domain Description: umuC Location: 2829940-2831200 bp Feature: domain Description: umuC Location: 2829940-2831 200 bp Feature: gene Location: 2977713-2978429 bp Feature: domain Description: Rve Location: 2977728-2978373 bp Feature: domain Description: Rve Location: 2977728-2978373 bp Feature: gene Location: 2978435-2978944 bp Feature: domain Description: PinE Location: 2978483-2978936 bp Feature: domain Description: PinE Location: 2978483-2978936 bp Feature: gene Location: 2980339-2981826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2980744-2981434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2980744-2981 434 bp Feature: gene Location: 2981906-2982325 bp Feature: domain Description: PRK10276 Location: 2981909-2982320 bp Feature: domain Description: PRK1 0276 Location: 2981 909-2982320 bp Feature: gene Location: 2982327-2983592 bp Feature: domain Description: umuC Location: 2982330-2983590 bp Feature: domain Description: umuC Location: 2982330-2983590 bp Feature: gene Location: 4256409-4257467 bp Feature: domain Description: YccC Location: 4256415-4257453 bp Feature: domain Description: YccC Location: 425641 5-4257453 bp Feature: gene Location: 4257566-4258039 bp Feature: domain Description: PRK10016 Location: 4257569-4258028 bp Feature: domain Description: PRK1 001 6 Location: 4257569-4258028 bp Feature: gene Location: 4258121-4259605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4258523-4259213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4258523-425921 3 bp Feature: gene Location: 4259614-4259781 bp Feature: gene Location: 4260126-4261295 bp Feature: domain Description: dacD Location: 4260135-4261290 bp Feature: domain Description: dacD Location: 42601 35-4261 290 bp Feature: gene Location: 4710604-4711188 bp Feature: domain Description: Terminase_2 Location: 4710649-4711114 bp Feature: domain Description: Terminase_2 Location: 471 0649-471 1 1 1 4 bp Feature: gene Location: 4711266-4711523 bp Feature: gene Location: 4711924-4713411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4712329-4713019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 2329-471 301 9 bp Feature: gene Location: 4713508-4713846 bp Feature: gene Location: 4714042-4714662 bp Feature: gene Location: 4873194-4873427 bp Feature: domain Description: DinI Location: 4873239-4873422 bp Feature: domain Description: DinI Location: 4873239-4873422 bp Feature: gene Location: 4873439-4873627 bp Feature: gene Location: 4873735-4875219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4874137-4874827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48741 37-4874827 bp Feature: gene Location: 4875228-4875395 bp Feature: gene Location: 4875700-4878084 bp Feature: domain Description: Phage_GPA Location: 4876264-4877230 bp Feature: domain Description: Phage_GPA Location: 4876264-4877230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, AbiH (pfam14253), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), Terminase_2 (pfam03592), Phage_GPA (pfam05840)

Seq: CP023725.1 Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed3, complete sequence (103454 bp)
Overview 1 RT 1: 35052-39241 bp Neighborhood of RT #1 [35052, 39241] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 35052-35723 bp Feature: domain Description: Plasmid_stab_B Location: 35067-35274 bp Feature: domain Description: Plasmid_stab_B Location: 35067-352 74 bp Feature: domain Description: Plasmid_stab_B Location: 35379-35586 bp Feature: domain Description: Plasmid_stab_B Location: 35379-35586 bp Feature: gene Location: 35726-36697 bp Feature: domain Description: StbA Location: 35729-36674 bp Feature: domain Description: StbA Location: 3572 9-36674 bp Feature: gene Location: 36946-38433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37351-38041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37351-38041 bp Feature: gene Location: 38439-38606 bp Feature: gene Location: 38846-39241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII