myRT

myRT report for GCA_003204135.1_ASM320413v1

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Seq: CP029736.1 Providencia rettgeri strain AR_0082 chromosome, complete genome (4309166 bp)
Overview 1 RT 1: 1588199-1593029 bp Neighborhood of RT #1 [1588199, 1593400] COG3804 RVT-UG11 VgrG Feature: gene Location: 1588199-1588434 bp Feature: domain Description: COG3804 Location: 1588214-1588379 bp Feature: domain Description: COG3804 Location: 1 58821 4-1 588379 bp Feature: gene Location: 1588997-1589362 bp Feature: gene Location: 1589502-1590314 bp Ori: AWS50611.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1589679-1590132 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 589679-1 5901 32 bp Feature: gene Location: 1590952-1591176 bp Feature: gene Location: 1591727-1593400 bp Ori: AWS50613.1 Feature: domain Description: VgrG Location: 1592660-1593029 bp Feature: domain Description: VgrG Location: 1 592660-1 593029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3804 (Uncharacterized protein ), RVT-UG11, VgrG (COG3501)

Seq: CP029737.1 Providencia rettgeri strain AR_0082 plasmid unnamed, complete sequence (144970 bp)
Overview 1 RT 1: 29226-35152 bp Neighborhood of RT #1 [29226, 35152] HD_2 RVT-GII GIIM PRK06850 Feature: gene Location: 29226-29831 bp Ori: AWS53149.1 Feature: domain Description: HD_2 Location: 29250-29757 bp Feature: domain Description: HD_2 Location: 2 92 50-2 9757 bp Feature: gene Location: 29903-30106 bp Feature: gene Location: 30352-31740 bp Ori: AWS53151.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30682-31300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30682 -31300 bp Feature: domain Description: GIIM Note: maturase Location: 31354-31567 bp Feature: domain Description: GIIM Note: maturase Location: 31354-31567 bp Feature: gene Location: 32225-34678 bp Ori: AWS53152.1 Feature: domain Description: PRK06850 Location: 32414-33584 bp Feature: domain Description: PRK06850 Location: 32 414-33584 bp Feature: gene Location: 34766-35152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HD_2 (pfam12917), RVT-GII, GIIM (pfam08388), PRK06850 (hypothetical protein; Provisional)