myRT

myRT report for GCA_003260975.1_ASM326097v1

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Seq: CP030041.1 Echinicola strongylocentroti strain MEBiC08714 chromosome, complete genome (6252144 bp)
Overview 1 RT 1: 735975-748098 bp 2 RT 2: 1186075-1189665 bp Neighborhood of RT #1 [735975, 748106] Gp49 RVT-GII GIIM RVT-GII GIIM DUF2268 DUF4375 MORN_2 MORN_2 MORN_2 YwqK Neighborhood of RT #2 [1186075, 1189665] HTH_ARSR RVT-GII GIIM TrmB Feature: gene Location: 735975-736307 bp Ori: AWW29154.1 Feature: domain Description: Gp49 Location: 736020-736281 bp Feature: domain Description: Gp49 Location: 736020-736281 bp Feature: gene Location: 736539-737135 bp Feature: gene Location: 737842-739154 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738037-738652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738037-738652 bp Feature: domain Description: GIIM Note: maturase Location: 738727-738913 bp Feature: domain Description: GIIM Note: maturase Location: 738727-73891 3 bp Feature: gene Location: 739239-740264 bp Feature: gene Location: 740398-740616 bp Feature: gene Location: 742065-742610 bp Feature: gene Location: 742768-743286 bp Feature: gene Location: 743409-744629 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743622-744270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743622-744270 bp Feature: domain Description: GIIM Note: maturase Location: 744363-744531 bp Feature: domain Description: GIIM Note: maturase Location: 744363-744531 bp Feature: gene Location: 745339-746259 bp Ori: AWW33027.1 Feature: domain Description: DUF2268 Location: 745753-746218 bp Feature: domain Description: DUF2268 Location: 745753-74621 8 bp Feature: gene Location: 746850-748106 bp Ori: AWW29162.1 Feature: domain Description: DUF4375 Location: 747051-747399 bp Feature: domain Description: DUF4375 Location: 747051 -747399 bp Feature: domain Description: MORN_2 Location: 747522-747579 bp Feature: domain Description: MORN_2 Location: 747522-747579 bp Feature: domain Description: MORN_2 Location: 747675-747717 bp Feature: domain Description: MORN_2 Location: 747675-74771 7 bp Feature: domain Description: MORN_2 Location: 747735-747798 bp Feature: domain Description: MORN_2 Location: 747735-747798 bp Feature: domain Description: YwqK Location: 747921-748098 bp Feature: domain Description: YwqK Location: 747921 -748098 bp Feature: gene Location: 1186075-1186452 bp Ori: AWW29478.1 Feature: domain Description: HTH_ARSR Location: 1186195-1186396 bp Feature: domain Description: HTH_ARSR Location: 1 1 861 95-1 1 86396 bp Feature: gene Location: 1186752-1186991 bp Feature: gene Location: 1187125-1188339 bp Ori: AWW29479.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1187380-1188040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 87380-1 1 88040 bp Feature: domain Description: GIIM Note: maturase Location: 1188127-1188304 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 881 27-1 1 88304 bp Feature: gene Location: 1189079-1189321 bp Ori: AWW29480.1 Feature: domain Description: TrmB Location: 1189124-1189295 bp Feature: domain Description: TrmB Location: 1 1 891 24-1 1 89295 bp Feature: gene Location: 1189378-1189665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gp49 (pfam05973), RVT-GII, GIIM (pfam08388), DUF2268 (pfam10026), DUF4375 (pfam14300), MORN_2 (pfam07661), YwqK (COG2849), HTH_ARSR (smart00418), TrmB (pfam01978)