myRT

myRT report for GCA_003261055.1_ASM326105v1

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Seq: CP030073.1 Streptomyces sp. ZFG47 chromosome, complete genome (9269371 bp)
Overview 1 RT 1: 455929-462220 bp 2 RT 2: 8660833-8666232 bp 3 RT 3: 8902598-8910338 bp Neighborhood of RT #1 [455929, 462220] FAD_binding_4 MFS_MMR_MDR_like RVT_N RVT-GII GIIM HNH Neighborhood of RT #2 [8660833, 8666273] DDE_Tnp_1_2 RVT_N RVT-GII GIIM HNH InsQ Neighborhood of RT #3 [8902598, 8910385] Aes RVT_N RVT-GII GIIM HNH DUF4096 COG3293 sensory_box sensory_box GAF SpoIIE HATPase_RsbW-like Feature: gene Location: 455929-457239 bp Ori: AWW35576.1 Feature: domain Description: FAD_binding_4 Location: 456040-456445 bp Feature: domain Description: FAD_binding_4 Location: 456040-456445 bp Feature: gene Location: 457513-458988 bp Ori: AWW35577.1 Feature: domain Description: MFS_MMR_MDR_like Location: 457570-458887 bp Feature: domain Description: MFS_MMR_MDR_like Location: 457570-458887 bp Feature: gene Location: 459130-460851 bp Ori: AWW42194.1 Gene: ltrA Feature: domain Description: RVT_N Location: 459166-459406 bp Feature: domain Description: RVT_N Location: 4591 66-459406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459463-460120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459463-4601 20 bp Feature: domain Description: GIIM Note: maturase Location: 460171-460405 bp Feature: domain Description: GIIM Note: maturase Location: 4601 71 -460405 bp Feature: domain Description: HNH Note: nucleases Location: 460726-460831 bp Feature: domain Description: HNH Note: nucleases Location: 460726-460831 bp Feature: gene Location: 461637-461705 bp Feature: gene Location: 461855-462220 bp Feature: gene Location: 8660833-8661278 bp Feature: gene Location: 8661603-8661788 bp Feature: domain Description: DDE_Tnp_1_2 Location: 8661606-8661789 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 8661 606-8661 789 bp Feature: gene Location: 8662486-8664207 bp Ori: AWW42931.1 Gene: ltrA Feature: domain Description: RVT_N Location: 8662522-8662762 bp Feature: domain Description: RVT_N Location: 8662522-8662762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8662819-8663476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 866281 9-8663476 bp Feature: domain Description: GIIM Note: maturase Location: 8663527-8663761 bp Feature: domain Description: GIIM Note: maturase Location: 8663527-8663761 bp Feature: domain Description: HNH Note: nucleases Location: 8664082-8664187 bp Feature: domain Description: HNH Note: nucleases Location: 8664082-86641 87 bp Feature: gene Location: 8664486-8665532 bp Feature: gene Location: 8665719-8666273 bp Feature: domain Description: InsQ Location: 8665926-8666232 bp Feature: domain Description: InsQ Location: 8665926-8666232 bp Feature: gene Location: 8902598-8903548 bp Ori: AWW41887.1 Feature: domain Description: Aes Location: 8902766-8903534 bp Feature: domain Description: Aes Location: 8902766-8903534 bp Feature: gene Location: 8904098-8904448 bp Feature: gene Location: 8904686-8906407 bp Ori: AWW42951.1 Gene: ltrA Feature: domain Description: RVT_N Location: 8904722-8904962 bp Feature: domain Description: RVT_N Location: 8904722-8904962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8905019-8905676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890501 9-8905676 bp Feature: domain Description: GIIM Note: maturase Location: 8905727-8905961 bp Feature: domain Description: GIIM Note: maturase Location: 8905727-8905961 bp Feature: domain Description: HNH Note: nucleases Location: 8906282-8906387 bp Feature: domain Description: HNH Note: nucleases Location: 8906282-8906387 bp Feature: gene Location: 8907033-8907776 bp Ori: AWW42952.1 Feature: domain Description: DUF4096 Location: 8907036-8907228 bp Feature: domain Description: DUF4096 Location: 8907036-8907228 bp Feature: domain Description: COG3293 Location: 8907351-8907705 bp Feature: domain Description: COG3293 Location: 8907351 -8907705 bp Feature: gene Location: 8907899-8910385 bp Ori: AWW42953.1 Feature: domain Description: sensory_box Location: 8907965-8908271 bp Feature: domain Description: sensory_box Location: 8907965-8908271 bp Feature: domain Description: sensory_box Location: 8908316-8908673 bp Feature: domain Description: sensory_box Location: 890831 6-8908673 bp Feature: domain Description: GAF Location: 8908898-8909213 bp Feature: domain Description: GAF Location: 8908898-890921 3 bp Feature: domain Description: SpoIIE Location: 8909387-8909969 bp Feature: domain Description: SpoIIE Location: 8909387-8909969 bp Feature: domain Description: HATPase_RsbW-like Location: 8910107-8910338 bp Feature: domain Description: HATPase_RsbW-like Location: 891 01 07-891 0338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FAD_binding_4 (pfam01565), MFS_MMR_MDR_like (cd17504), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DDE_Tnp_1_2 (pfam13586), InsQ (COG0675), Aes (COG0657), DUF4096 (pfam13340)
COG3293 (Transposase ), sensory_box (TIGR00229), GAF (smart00065), SpoIIE (pfam07228), HATPase_RsbW-like (cd16936)

Seq: CP030074.1 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence (969901 bp)
Overview 1 RT 1: 333821-340220 bp 2 RT 2: 361953-368749 bp 3 RT 3: 897419-904685 bp Neighborhood of RT #1 [333821, 340261] COG3293 COG3293 RVT-GII GIIM DDE_Tnp_1_4 CypX Neighborhood of RT #2 [361953, 369483] PHA02517 HTH_38 HTH_38 Tra8 RVT_N RVT-GII GIIM HNH DUF4096 MltE SLT PGRP Neighborhood of RT #3 [897419, 905197] HTH_Tnp_4 DDE_Tnp_1_assoc RVT-GII RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_assoc COG3482 Feature: gene Location: 333821-334654 bp Ori: AWW43233.1 Feature: domain Description: COG3293 Location: 333833-334166 bp Feature: domain Description: COG32 93 Location: 333833-334166 bp Feature: domain Description: COG3293 Location: 334202-334580 bp Feature: domain Description: COG32 93 Location: 3342 02 -334580 bp Feature: gene Location: 334569-335069 bp Feature: gene Location: 335783-337165 bp Ori: AWW43235.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336101-336734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336101-336734 bp Feature: domain Description: GIIM Note: maturase Location: 336818-337031 bp Feature: domain Description: GIIM Note: maturase Location: 336818-337031 bp Feature: gene Location: 337370-338743 bp Ori: AWW43236.1 Feature: domain Description: DDE_Tnp_1_4 Location: 337388-338732 bp Feature: domain Description: DDE_Tnp_1_4 Location: 337388-338732 bp Feature: gene Location: 338948-340261 bp Ori: AWW43237.1 Feature: domain Description: CypX Location: 339053-340220 bp Feature: domain Description: CypX Location: 339053-3402 2 0 bp Feature: gene Location: 361953-362843 bp Ori: AWW43251.1 Feature: domain Description: PHA02517 Location: 362022-362808 bp Feature: domain Description: PHA02 517 Location: 362 02 2 -362 808 bp Feature: gene Location: 362942-363481 bp Feature: domain Description: HTH_38 Location: 362999-363086 bp Feature: domain Description: HTH_38 Location: 362 999-363086 bp Feature: domain Description: HTH_38 Location: 363131-363176 bp Feature: domain Description: HTH_38 Location: 363131-363176 bp Feature: domain Description: Tra8 Location: 363332-363479 bp Feature: domain Description: Tra8 Location: 363332 -363479 bp Feature: gene Location: 363765-365486 bp Ori: AWW43639.1 Gene: ltrA Feature: domain Description: RVT_N Location: 363801-364041 bp Feature: domain Description: RVT_N Location: 363801-364041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364098-364755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364098-364755 bp Feature: domain Description: GIIM Note: maturase Location: 364806-365040 bp Feature: domain Description: GIIM Note: maturase Location: 364806-365040 bp Feature: domain Description: HNH Note: nucleases Location: 365361-365466 bp Feature: domain Description: HNH Note: nucleases Location: 365361-365466 bp Feature: gene Location: 366112-366941 bp Feature: domain Description: DUF4096 Location: 366148-366358 bp Feature: domain Description: DUF4096 Location: 366148-366358 bp Feature: gene Location: 367543-369483 bp Ori: AWW43252.1 Feature: domain Description: MltE Location: 367684-367786 bp Feature: domain Description: MltE Location: 367684-367786 bp Feature: domain Description: SLT Location: 367960-368104 bp Feature: domain Description: SLT Location: 367960-368104 bp Feature: domain Description: PGRP Location: 368371-368749 bp Feature: domain Description: PGRP Location: 368371-368749 bp Feature: gene Location: 897419-897563 bp Feature: domain Description: HTH_Tnp_4 Location: 897422-897533 bp Feature: domain Description: HTH_Tnp_4 Location: 89742 2 -897533 bp Feature: gene Location: 898913-899485 bp Ori: AWW43553.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 899012-899270 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 899012 -8992 70 bp Feature: gene Location: 899486-900452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 899588-900077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 899588-900077 bp Feature: gene Location: 901171-902814 bp Ori: AWW43674.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901291-902083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9012 91-902 083 bp Feature: domain Description: Intron_maturas2 Location: 902197-902416 bp Feature: domain Description: Intron_maturas2 Location: 902 197-902 416 bp Feature: domain Description: HNHc Note: nucleases Location: 902584-902773 bp Feature: domain Description: HNHc Note: nucleases Location: 902 584-902 773 bp Feature: gene Location: 903147-903533 bp Ori: AWW43554.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 903246-903417 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 9032 46-903417 bp Feature: gene Location: 904016-905197 bp Ori: AWW43555.1 Feature: domain Description: COG3482 Location: 904028-904685 bp Feature: domain Description: COG3482 Location: 90402 8-904685 bp Sorry, your browser does 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Associated domains:myRT COG3293 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701), CypX (COG2124), PHA02517 (putative transposase OrfB; Reviewed), HTH_38 (pfam13936), Tra8 (COG2826), RVT_N (pfam13655), HNH (pfam01844)
DUF4096 (pfam13340), MltE (COG0741), SLT (pfam01464), PGRP (smart00701), HTH_Tnp_4 (pfam13613), DDE_Tnp_1_assoc (pfam13808), Intron_maturas2 (pfam01348), HNHc (smart00507), COG3482 (Uncharacterized protein )