myRT

myRT report for GCA_003261955.2_ASM326195v2

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Seq: CP033392.1 Klebsiella pneumoniae strain WCHKP015625 plasmid p1_015625, complete sequence (11904 bp)
Overview 1 RT 1: 9549-11534 bp Neighborhood of RT #1 [9549, 11926] RVT-GII Feature: gene Location: 9549-9794 bp Feature: gene Location: 10191-10442 bp Feature: gene Location: 10442-11926 bp Ori: AYQ61243.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10844-11534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0844-1 1 534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CP033395.1 Klebsiella pneumoniae strain WCHKP015625 plasmid pKPC12_015625, complete sequence (55373 bp)
Overview 1 RT 1: 5776-9978 bp Neighborhood of RT #1 [5776, 9995] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 5776-6447 bp Ori: AYQ61421.1 Feature: domain Description: Plasmid_stab_B Location: 5791-5998 bp Feature: domain Description: Plasmid_stab_B Location: 5791-5998 bp Feature: domain Description: Plasmid_stab_B Location: 6103-6310 bp Feature: domain Description: Plasmid_stab_B Location: 6103-6310 bp Feature: gene Location: 6450-7421 bp Ori: AYQ61422.1 Feature: domain Description: StbA Location: 6453-7398 bp Feature: domain Description: StbA Location: 6453-7398 bp Feature: gene Location: 7670-9154 bp Ori: AYQ61423.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8072-8762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8072 -8762 bp Feature: gene Location: 9154-9405 bp Feature: gene Location: 9564-9995 bp Ori: AYQ61425.1 Feature: domain Description: PRK10276 Location: 9615-9978 bp Feature: domain Description: PRK102 76 Location: 9615-9978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP033396.1 Klebsiella pneumoniae strain WCHKP015625 chromosome, complete genome (5445546 bp)
Overview 1 RT 1: 1243809-1248789 bp 2 RT 2: 1407941-1410627 bp 3 RT 3: 1868219-1873091 bp 4 RT 4: 1889609-1895871 bp 5 RT 5: 3133566-3137704 bp 6 RT 6: 3285958-3290057 bp 7 RT 7: 3358790-3363052 bp 8 RT 8: 3683541-3688379 bp Neighborhood of RT #1 [1243809, 1248789] Phage_GPA RVT-GII Neighborhood of RT #2 [1407941, 1410627] DinI RVT-GII Neighborhood of RT #3 [1868219, 1873105] dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [1889609, 1895871] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #5 [3133566, 3137704] umuC PRK10276 RVT-GII Neighborhood of RT #6 [3285958, 3290068] umuC PRK10276 RVT-GII DinI Neighborhood of RT #7 [3358790, 3363090] PRK10597 RVT-GII PRK05318 Neighborhood of RT #8 [3683541, 3688429] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1243809-1246193 bp Ori: AYQ62662.1 Feature: domain Description: Phage_GPA Location: 1244373-1245339 bp Feature: domain Description: Phage_GPA Location: 12443 73 -12453 3 9 bp Feature: gene Location: 1246423-1246674 bp Feature: gene Location: 1246674-1248158 bp Ori: AYQ62664.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247076-1247766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247076-1247766 bp Feature: gene Location: 1248255-1248593 bp Feature: gene Location: 1248586-1248789 bp Feature: gene Location: 1407941-1408174 bp Ori: AYQ62823.1 Feature: domain Description: DinI Location: 1407986-1408169 bp Feature: domain Description: DinI Location: 1407986-1408169 bp Feature: gene Location: 1408186-1408374 bp Feature: gene Location: 1408482-1409966 bp Ori: AYQ62825.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1408884-1409574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1408884-1409574 bp Feature: gene Location: 1409966-1410217 bp Feature: gene Location: 1410370-1410627 bp Feature: gene Location: 1868219-1869388 bp Ori: AYQ63206.1 Gene: dacD Feature: domain Description: dacD Location: 1868228-1869383 bp Feature: domain Description: dacD Location: 1868228-18693 83 bp Feature: gene Location: 1869658-1869909 bp Feature: gene Location: 1869909-1871393 bp Ori: AYQ63208.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870311-1871001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18703 11-1871001 bp Feature: gene Location: 1871475-1871948 bp Ori: AYQ63209.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1871478-1871937 bp Feature: domain Description: PRK10016 Location: 1871478-187193 7 bp Feature: gene Location: 1872047-1873105 bp Ori: AYQ63210.1 Feature: domain Description: YccC Location: 1872053-1873091 bp Feature: domain Description: YccC Location: 1872053 -1873 091 bp Feature: gene Location: 1889609-1890712 bp Ori: AYQ63229.1 Feature: domain Description: STKc_PknB_like Location: 1889741-1890182 bp Feature: domain Description: STKc_PknB_like Location: 1889741-1890182 bp Feature: gene Location: 1890782-1891024 bp Feature: gene Location: 1891271-1892371 bp Ori: AYQ63230.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1891454-1891982 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1891454-1891982 bp Feature: gene Location: 1892486-1894732 bp Ori: AYQ63231.1 Feature: domain Description: AAA_15 Location: 1892489-1893497 bp Feature: domain Description: AAA_15 Location: 1892489-1893 497 bp Feature: gene Location: 1895641-1895871 bp Feature: gene Location: 3133566-3134831 bp Ori: AYQ64394.1 Gene: umuC Feature: domain Description: umuC Location: 3133569-3134829 bp Feature: domain Description: umuC Location: 3 13 3 569-3 13 4829 bp Feature: gene Location: 3134833-3135252 bp Ori: AYQ64395.1 Feature: domain Description: PRK10276 Location: 3134836-3135247 bp Feature: domain Description: PRK10276 Location: 3 13 483 6-3 13 5247 bp Feature: gene Location: 3135332-3136816 bp Ori: AYQ64396.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3135734-3136424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 13 573 4-3 13 6424 bp Feature: gene Location: 3136816-3137067 bp Feature: gene Location: 3137615-3137704 bp Feature: gene Location: 3285958-3287223 bp Ori: AYQ64542.1 Gene: umuC Feature: domain Description: umuC Location: 3285961-3287221 bp Feature: domain Description: umuC Location: 3 285961-3 287221 bp Feature: gene Location: 3287226-3287645 bp Ori: AYQ64543.1 Feature: domain Description: PRK10276 Location: 3287229-3287640 bp Feature: domain Description: PRK10276 Location: 3 287229-3 287640 bp Feature: gene Location: 3287724-3289208 bp Ori: AYQ64544.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3288126-3288816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 288126-3 288816 bp Feature: gene Location: 3289208-3289459 bp Feature: gene Location: 3289826-3290068 bp Ori: AYQ64546.1 Feature: domain Description: DinI Location: 3289877-3290057 bp Feature: domain Description: DinI Location: 3 289877-3 290057 bp Feature: gene Location: 3358790-3359080 bp Feature: gene Location: 3359092-3359325 bp Ori: AYQ64618.1 Feature: domain Description: PRK10597 Location: 3359095-3359320 bp Feature: domain Description: PRK10597 Location: 3 3 59095-3 3 593 20 bp Feature: gene Location: 3359404-3360888 bp Ori: AYQ64619.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3359806-3360496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 59806-3 3 60496 bp Feature: gene Location: 3360888-3361139 bp Feature: gene Location: 3361729-3363090 bp Ori: AYQ64621.1 Feature: domain Description: PRK05318 Location: 3361753-3363052 bp Feature: domain Description: PRK053 18 Location: 3 3 61753 -3 3 63 052 bp Feature: gene Location: 3683541-3684419 bp Ori: AYQ66610.1 Feature: domain Description: Phage_CI_repr Location: 3683568-3683751 bp Feature: domain Description: Phage_CI_repr Location: 3 683 568-3 683 751 bp Feature: domain Description: Phage_CI_repr Location: 3683880-3684072 bp Feature: domain Description: Phage_CI_repr Location: 3 683 880-3 684072 bp Feature: domain Description: Phage_CI_C Location: 3684099-3684393 bp Feature: domain Description: Phage_CI_C Location: 3 684099-3 6843 93 bp Feature: gene Location: 3684431-3685375 bp Feature: gene Location: 3685474-3686958 bp Ori: AYQ64914.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3685876-3686566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 685876-3 686566 bp Feature: gene Location: 3686958-3687209 bp Feature: gene Location: 3687377-3688429 bp Ori: AYQ64916.1 Feature: domain Description: int Location: 3687380-3688379 bp Feature: domain Description: int Location: 3 6873 80-3 6883 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)