myRT

myRT report for GCA_003265305.2_ASM326530v2

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Seq: CP033459.1 Alloprevotella sp. E39 chromosome, complete genome (2920169 bp)
Overview 1 RT 1: 522510-527707 bp 2 RT 2: 845892-852793 bp 3 RT 3: 2811532-2816670 bp Neighborhood of RT #1 [522510, 527707] FieF rpsA RVT-DGRs DUF1566 Neighborhood of RT #2 [845892, 852930] DUF488 RVT-AbiP2 PLDc_Nuc_like_unchar2 DEDD_Tnp_IS110 Transposase_20 Neighborhood of RT #3 [2811532, 2817311] RVT-Retrons Response_reg Feature: gene Location: 522510-523406 bp Ori: QFQ11926.1 Feature: domain Description: FieF Location: 522516-523398 bp Feature: domain Description: FieF Location: 52251 6-523398 bp Feature: gene Location: 523569-525335 bp Ori: QFQ11927.1 Feature: domain Description: rpsA Location: 523671-525225 bp Feature: domain Description: rpsA Location: 523671 -525225 bp Feature: gene Location: 525542-526693 bp Ori: QFQ11928.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 525731-526442 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 525731 -526442 bp Feature: gene Location: 526785-527072 bp Ori: QFQ11929.1 Feature: domain Description: DUF1566 Location: 526836-526971 bp Feature: domain Description: DUF1 566 Location: 526836-526971 bp Feature: gene Location: 527267-527707 bp Feature: gene Location: 845892-846353 bp Ori: QFQ13694.1 Feature: domain Description: DUF488 Location: 845952-846309 bp Feature: domain Description: DUF488 Location: 845952-846309 bp Feature: gene Location: 846366-847373 bp Feature: gene Location: 847592-849247 bp Ori: QFQ13695.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 848027-848483 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 848027-848483 bp Feature: gene Location: 849283-851319 bp Ori: QFQ12180.1 Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 849889-850297 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 849889-850297 bp Feature: gene Location: 851902-852930 bp Ori: QFQ12181.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 851920-852379 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 851 920-852379 bp Feature: domain Description: Transposase_20 Location: 852535-852793 bp Feature: domain Description: Transposase_20 Location: 852535-852793 bp Feature: gene Location: 2811532-2811714 bp Feature: gene Location: 2811818-2811946 bp Feature: gene Location: 2812215-2813921 bp Ori: QFQ13570.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2812398-2812986 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 281 2398-281 2986 bp Feature: gene Location: 2813918-2815126 bp Feature: gene Location: 2815131-2817311 bp Ori: QFQ13572.1 Feature: domain Description: Response_reg Location: 2816430-2816670 bp Feature: domain Description: Response_reg Location: 281 6430-281 6670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FieF (COG0053), rpsA (TIGR00717), RVT-DGRs, DUF1566 (pfam07603), DUF488 (pfam04343), RVT-AbiP2, PLDc_Nuc_like_unchar2 (cd09174), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT-Retrons
Response_reg (pfam00072)