myRT

myRT report for GCA_003268005.1_ASM326800v1

Download annotations/find similar RTs

Seq: CP014213.1 Methanosphaera sp. BMS, complete genome (2868093 bp)
Overview 1 RT 1: 100694-114989 bp 2 RT 2: 367291-371538 bp 3 RT 3: 692859-707380 bp 4 RT 4: 723095-733065 bp Neighborhood of RT #1 [100694, 116950] GlyGly_RbtA GlyGly_RbtA DUF2846 GlyGly_RbtA GlyGly_RbtA DUF2846 GlyGly_RbtA GlyGly_RbtA GlyGly_RbtA DUF2846 POMP_repeat POMP_repeat POMP_repeat POMP_repeat POMP_repeat POMP_repeat RVT_N RVT-GII GIIM Fn3_assoc Fn3_assoc Fn3_assoc Fn3_assoc Neighborhood of RT #2 [367291, 371538] RMtype1_S_SonII-TRD2-CR2_like RVT_N RVT-GII GIIM Neighborhood of RT #3 [692859, 707380] COG2405 POMP_repeat POMP_repeat POMP_repeat POMP_repeat Chlam_PMP POMP_repeat POMP_repeat POMP_repeat POMP_repeat Big_3_5 Big_3_5 POMP_repeat Big_3_5 Big_2 SlyX SlyX SlyX Big_3_5 Big_3_5 Big_3_5 RVT_N RVT-GII GIIM POMP_repeat POMP_repeat POMP_repeat POMP_repeat POMP_repeat POMP_repeat POMP_repeat Neighborhood of RT #4 [723095, 733229] SplB Big_3_5 Big_3_5 Big_3_5 Big_3_5 Big_3_5 Big_3_5 RVT_N RVT-GII GIIM KOG3713 Feature: gene Location: 100694-106585 bp Ori: AWX31625.1 Feature: domain Description: GlyGly_RbtA Location: 101300-101402 bp Feature: domain Description: GlyGly_RbtA Location: 1 01 300-1 01 402 bp Feature: domain Description: GlyGly_RbtA Location: 101444-101771 bp Feature: domain Description: GlyGly_RbtA Location: 1 01 444-1 01 771 bp Feature: domain Description: DUF2846 Location: 101975-102089 bp Feature: domain Description: DUF2846 Location: 1 01 975-1 02089 bp Feature: domain Description: GlyGly_RbtA Location: 102254-102641 bp Feature: domain Description: GlyGly_RbtA Location: 1 02254-1 02641 bp Feature: domain Description: GlyGly_RbtA Location: 103244-103388 bp Feature: domain Description: GlyGly_RbtA Location: 1 03244-1 03388 bp Feature: domain Description: DUF2846 Location: 103625-103736 bp Feature: domain Description: DUF2846 Location: 1 03625-1 03736 bp Feature: domain Description: GlyGly_RbtA Location: 104087-104225 bp Feature: domain Description: GlyGly_RbtA Location: 1 04087-1 04225 bp Feature: domain Description: GlyGly_RbtA Location: 104237-104474 bp Feature: domain Description: GlyGly_RbtA Location: 1 04237-1 04474 bp Feature: domain Description: GlyGly_RbtA Location: 104477-104717 bp Feature: domain Description: GlyGly_RbtA Location: 1 04477-1 0471 7 bp Feature: domain Description: DUF2846 Location: 104897-105053 bp Feature: domain Description: DUF2846 Location: 1 04897-1 05053 bp Feature: gene Location: 106913-110503 bp Ori: AWX31626.1 Feature: domain Description: POMP_repeat Location: 107501-107534 bp Feature: domain Description: POMP_repeat Location: 1 07501 -1 07534 bp Feature: domain Description: POMP_repeat Location: 107651-107684 bp Feature: domain Description: POMP_repeat Location: 1 07651 -1 07684 bp Feature: domain Description: POMP_repeat Location: 107723-107756 bp Feature: domain Description: POMP_repeat Location: 1 07723-1 07756 bp Feature: domain Description: POMP_repeat Location: 107801-107858 bp Feature: domain Description: POMP_repeat Location: 1 07801 -1 07858 bp Feature: domain Description: POMP_repeat Location: 108701-108734 bp Feature: domain Description: POMP_repeat Location: 1 08701 -1 08734 bp Feature: domain Description: POMP_repeat Location: 108779-108833 bp Feature: domain Description: POMP_repeat Location: 1 08779-1 08833 bp Feature: gene Location: 110930-112474 bp Ori: AWX31627.1 Feature: domain Description: RVT_N Location: 111014-111260 bp Feature: domain Description: RVT_N Location: 1 1 1 01 4-1 1 1 260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111314-111974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 31 4-1 1 1 974 bp Feature: domain Description: GIIM Note: maturase Location: 112043-112268 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 2043-1 1 2268 bp Feature: gene Location: 113133-113774 bp Feature: gene Location: 113774-116950 bp Ori: AWX31629.1 Feature: domain Description: Fn3_assoc Location: 114137-114281 bp Feature: domain Description: Fn3_assoc Location: 1 1 41 37-1 1 4281 bp Feature: domain Description: Fn3_assoc Location: 114359-114491 bp Feature: domain Description: Fn3_assoc Location: 1 1 4359-1 1 4491 bp Feature: domain Description: Fn3_assoc Location: 114593-114755 bp Feature: domain Description: Fn3_assoc Location: 1 1 4593-1 1 4755 bp Feature: domain Description: Fn3_assoc Location: 114857-114989 bp Feature: domain Description: Fn3_assoc Location: 1 1 4857-1 1 4989 bp Feature: gene Location: 367291-367551 bp Feature: gene Location: 367882-368445 bp Ori: AWX31795.1 Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 367891-368419 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 367891 -36841 9 bp Feature: gene Location: 368701-370245 bp Ori: AWX31796.1 Feature: domain Description: RVT_N Location: 368785-369031 bp Feature: domain Description: RVT_N Location: 368785-369031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369085-369745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369085-369745 bp Feature: domain Description: GIIM Note: maturase Location: 369814-370042 bp Feature: domain Description: GIIM Note: maturase Location: 36981 4-370042 bp Feature: gene Location: 370907-371161 bp Feature: gene Location: 371173-371538 bp Feature: gene Location: 692859-693431 bp Ori: AWX33582.1 Feature: domain Description: COG2405 Location: 692877-693357 bp Feature: domain Description: COG2405 Location: 692877-693357 bp Feature: gene Location: 693951-700931 bp Ori: AWX32008.1 Feature: domain Description: POMP_repeat Location: 694530-694599 bp Feature: domain Description: POMP_repeat Location: 694530-694599 bp Feature: domain Description: POMP_repeat Location: 694611-694680 bp Feature: domain Description: POMP_repeat Location: 69461 1 -694680 bp Feature: domain Description: POMP_repeat Location: 694686-694746 bp Feature: domain Description: POMP_repeat Location: 694686-694746 bp Feature: domain Description: POMP_repeat Location: 694857-694917 bp Feature: domain Description: POMP_repeat Location: 694857-69491 7 bp Feature: domain Description: Chlam_PMP Location: 695004-695055 bp Feature: domain Description: Chlam_PMP Location: 695004-695055 bp Feature: domain Description: POMP_repeat Location: 695178-695235 bp Feature: domain Description: POMP_repeat Location: 6951 78-695235 bp Feature: domain Description: POMP_repeat Location: 695247-695304 bp Feature: domain Description: POMP_repeat Location: 695247-695304 bp Feature: domain Description: POMP_repeat Location: 695496-695559 bp Feature: domain Description: POMP_repeat Location: 695496-695559 bp Feature: domain Description: POMP_repeat Location: 695745-695790 bp Feature: domain Description: POMP_repeat Location: 695745-695790 bp Feature: domain Description: Big_3_5 Location: 696267-696510 bp Feature: domain Description: Big_3_5 Location: 696267-69651 0 bp Feature: domain Description: Big_3_5 Location: 696840-697035 bp Feature: domain Description: Big_3_5 Location: 696840-697035 bp Feature: domain Description: POMP_repeat Location: 697653-697707 bp Feature: domain Description: POMP_repeat Location: 697653-697707 bp Feature: domain Description: Big_3_5 Location: 698589-698805 bp Feature: domain Description: Big_3_5 Location: 698589-698805 bp Feature: domain Description: Big_2 Location: 698820-699009 bp Feature: domain Description: Big_2 Location: 698820-699009 bp Feature: domain Description: SlyX Location: 699330-699444 bp Feature: domain Description: SlyX Location: 699330-699444 bp Feature: domain Description: SlyX Location: 699570-699708 bp Feature: domain Description: SlyX Location: 699570-699708 bp Feature: domain Description: SlyX Location: 699819-699945 bp Feature: domain Description: SlyX Location: 69981 9-699945 bp Feature: domain Description: Big_3_5 Location: 700077-700347 bp Feature: domain Description: Big_3_5 Location: 700077-700347 bp Feature: domain Description: Big_3_5 Location: 700392-700614 bp Feature: domain Description: Big_3_5 Location: 700392-70061 4 bp Feature: domain Description: Big_3_5 Location: 700686-700866 bp Feature: domain Description: Big_3_5 Location: 700686-700866 bp Feature: gene Location: 701740-703284 bp Ori: AWX32009.1 Feature: domain Description: RVT_N Location: 701824-702070 bp Feature: domain Description: RVT_N Location: 701 824-702070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702124-702784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7021 24-702784 bp Feature: domain Description: GIIM Note: maturase Location: 702853-703081 bp Feature: domain Description: GIIM Note: maturase Location: 702853-703081 bp Feature: gene Location: 703924-706743 bp Ori: AWX32010.1 Feature: domain Description: POMP_repeat Location: 704800-704845 bp Feature: domain Description: POMP_repeat Location: 704800-704845 bp Feature: domain Description: POMP_repeat Location: 704875-704923 bp Feature: domain Description: POMP_repeat Location: 704875-704923 bp Feature: domain Description: POMP_repeat Location: 704956-705001 bp Feature: domain Description: POMP_repeat Location: 704956-705001 bp Feature: domain Description: POMP_repeat Location: 705034-705085 bp Feature: domain Description: POMP_repeat Location: 705034-705085 bp Feature: domain Description: POMP_repeat Location: 705103-705157 bp Feature: domain Description: POMP_repeat Location: 7051 03-7051 57 bp Feature: domain Description: POMP_repeat Location: 706090-706138 bp Feature: domain Description: POMP_repeat Location: 706090-7061 38 bp Feature: domain Description: POMP_repeat Location: 706168-706216 bp Feature: domain Description: POMP_repeat Location: 7061 68-70621 6 bp Feature: gene Location: 707009-707380 bp Feature: gene Location: 723095-723964 bp Ori: AWX32028.1 Feature: domain Description: SplB Location: 723134-723824 bp Feature: domain Description: SplB Location: 7231 34-723824 bp Feature: gene Location: 724121-728665 bp Ori: AWX32029.1 Feature: domain Description: Big_3_5 Location: 726290-726509 bp Feature: domain Description: Big_3_5 Location: 726290-726509 bp Feature: domain Description: Big_3_5 Location: 726557-726812 bp Feature: domain Description: Big_3_5 Location: 726557-72681 2 bp Feature: domain Description: Big_3_5 Location: 726848-727094 bp Feature: domain Description: Big_3_5 Location: 726848-727094 bp Feature: domain Description: Big_3_5 Location: 727127-727376 bp Feature: domain Description: Big_3_5 Location: 7271 27-727376 bp Feature: domain Description: Big_3_5 Location: 727412-727661 bp Feature: domain Description: Big_3_5 Location: 72741 2-727661 bp Feature: domain Description: Big_3_5 Location: 727697-727988 bp Feature: domain Description: Big_3_5 Location: 727697-727988 bp Feature: gene Location: 729061-730623 bp Ori: AWX32030.1 Feature: domain Description: RVT_N Location: 729151-729397 bp Feature: domain Description: RVT_N Location: 7291 51 -729397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729451-730111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729451 -7301 1 1 bp Feature: domain Description: GIIM Note: maturase Location: 730174-730408 bp Feature: domain Description: GIIM Note: maturase Location: 7301 74-730408 bp Feature: gene Location: 731198-731398 bp Feature: gene Location: 732396-733229 bp Ori: AWX32032.1 Feature: domain Description: KOG3713 Location: 732687-733065 bp Feature: domain Description: KOG371 3 Location: 732687-733065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlyGly_RbtA (TIGR04212), DUF2846 (pfam11008), POMP_repeat (TIGR01376), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Fn3_assoc (pfam13287), RMtype1_S_SonII-TRD2-CR2_like (cd17246), COG2405 (Predicted nucleic acid-binding protein, contains PIN domain ), Chlam_PMP (pfam02415)
Big_3_5 (pfam16640), Big_2 (pfam02368), SlyX (pfam04102), SplB, KOG3713 (KOG3713, Voltage-gated K+ channel KCNB/KCNC )