myRT

myRT report for GCA_003268655.1_ASM326865v1

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Seq: CP029642.1 Arthrobacter sp. DCT-5 chromosome, complete genome (4359122 bp)
Overview 1 RT 1: 1679698-1686704 bp Neighborhood of RT #1 [1679698, 1686718] Ad_Cy_reg CHD DUF222 DUF222 HNH RVT-Retrons Lipase_GDSL_2 LpqC Feature: gene Location: 1679698-1680711 bp Feature: domain Description: Ad_Cy_reg Location: 1679710-1680085 bp Feature: domain Description: Ad_Cy_reg Location: 1 67971 0-1 680085 bp Feature: domain Description: CHD Location: 1680214-1680670 bp Feature: domain Description: CHD Location: 1 68021 4-1 680670 bp Feature: gene Location: 1680854-1683226 bp Feature: domain Description: DUF222 Location: 1681163-1681703 bp Feature: domain Description: DUF222 Location: 1 681 1 63-1 681 703 bp Feature: domain Description: DUF222 Location: 1682615-1682963 bp Feature: domain Description: DUF222 Location: 1 68261 5-1 682963 bp Feature: domain Description: HNH Note: nucleases Location: 1682984-1683101 bp Feature: domain Description: HNH Note: nucleases Location: 1 682984-1 6831 01 bp Feature: gene Location: 1683320-1684699 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1683848-1684472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 683848-1 684472 bp Feature: gene Location: 1685024-1685836 bp Feature: domain Description: Lipase_GDSL_2 Location: 1685252-1685759 bp Feature: domain Description: Lipase_GDSL_2 Location: 1 685252-1 685759 bp Feature: gene Location: 1685843-1686718 bp Feature: domain Description: LpqC Location: 1685885-1686704 bp Feature: domain Description: LpqC Location: 1 685885-1 686704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ad_Cy_reg (pfam16701), CHD (cd07302), DUF222 (pfam02720), HNH (pfam01844), RVT-Retrons, Lipase_GDSL_2 (pfam13472), LpqC (COG3509)

Seq: CP029643.1 Arthrobacter sp. DCT-5 plasmid pDCT5, complete sequence (171632 bp)
Overview 1 RT 1: 139320-144305 bp Neighborhood of RT #1 [139320, 144322] RVT_N RVT-GII GIIM DDE_Tnp_1_4 TctC Feature: gene Location: 139320-139472 bp Feature: gene Location: 139604-139774 bp Feature: gene Location: 139998-141818 bp Feature: domain Description: RVT_N Location: 140127-140370 bp Feature: domain Description: RVT_N Location: 14012 7-140370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140424-141081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14042 4-141081 bp Feature: domain Description: GIIM Note: maturase Location: 141135-141366 bp Feature: domain Description: GIIM Note: maturase Location: 141135-141366 bp Feature: gene Location: 141835-143307 bp Feature: domain Description: DDE_Tnp_1_4 Location: 141931-143299 bp Feature: domain Description: DDE_Tnp_1_4 Location: 141931-1432 99 bp Feature: gene Location: 143600-144322 bp Feature: domain Description: TctC Location: 143624-144305 bp Feature: domain Description: TctC Location: 14362 4-144305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701), TctC (pfam03401)