myRT

myRT report for GCA_003286395.1_ASM328639v1

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Seq: CP029640.1 Paraburkholderia sp. DCR13 chromosome 1, complete sequence (3130508 bp)
Overview 1 RT 1: 2482608-2489643 bp 2 RT 2: 2571833-2578200 bp Neighborhood of RT #1 [2482608, 2489780] moaC PglL_A Wzy_C Wzy_C_2 RVT_N RVT-GII GIIM HNHc PilA R_switched_YjbE Neighborhood of RT #2 [2571833, 2578220] COG2928 COG2331 RVT_N RVT-GII GIIM HNH TPMT ubiB Feature: gene Location: 2482608-2483087 bp Feature: domain Description: moaC Location: 2482614-2483079 bp Feature: domain Description: moaC Location: 248261 4-2483079 bp Feature: gene Location: 2483185-2485008 bp Feature: domain Description: PglL_A Location: 2483692-2483764 bp Feature: domain Description: PglL_A Location: 2483692-2483764 bp Feature: domain Description: Wzy_C Location: 2483809-2484301 bp Feature: domain Description: Wzy_C Location: 2483809-2484301 bp Feature: domain Description: Wzy_C_2 Location: 2484367-2484865 bp Feature: domain Description: Wzy_C_2 Location: 2484367-2484865 bp Feature: gene Location: 2485132-2486691 bp Feature: domain Description: RVT_N Location: 2485135-2485285 bp Feature: domain Description: RVT_N Location: 24851 35-2485285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485330-2485975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485330-2485975 bp Feature: domain Description: GIIM Note: maturase Location: 2486029-2486263 bp Feature: domain Description: GIIM Note: maturase Location: 2486029-2486263 bp Feature: domain Description: HNHc Note: nucleases Location: 2486494-2486647 bp Feature: domain Description: HNHc Note: nucleases Location: 2486494-2486647 bp Feature: gene Location: 2488110-2488799 bp Feature: domain Description: PilA Location: 2488296-2488521 bp Feature: domain Description: PilA Location: 2488296-2488521 bp Feature: gene Location: 2488983-2489780 bp Feature: domain Description: R_switched_YjbE Location: 2489106-2489643 bp Feature: domain Description: R_switched_YjbE Location: 24891 06-2489643 bp Feature: gene Location: 2571833-2572462 bp Feature: domain Description: COG2928 Location: 2571851-2572433 bp Feature: domain Description: COG2928 Location: 2571 851 -2572433 bp Feature: gene Location: 2572537-2572887 bp Feature: domain Description: COG2331 Location: 2572540-2572762 bp Feature: domain Description: COG2331 Location: 2572540-2572762 bp Feature: gene Location: 2573032-2574732 bp Feature: domain Description: RVT_N Location: 2573089-2573332 bp Feature: domain Description: RVT_N Location: 2573089-2573332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2573377-2574025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2573377-2574025 bp Feature: domain Description: GIIM Note: maturase Location: 2574076-2574310 bp Feature: domain Description: GIIM Note: maturase Location: 2574076-257431 0 bp Feature: domain Description: HNH Note: nucleases Location: 2574562-2574697 bp Feature: domain Description: HNH Note: nucleases Location: 2574562-2574697 bp Feature: gene Location: 2575910-2576587 bp Feature: domain Description: TPMT Location: 2575994-2576474 bp Feature: domain Description: TPMT Location: 2575994-2576474 bp Feature: gene Location: 2576643-2578220 bp Feature: domain Description: ubiB Location: 2576646-2578200 bp Feature: domain Description: ubiB Location: 2576646-2578200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT moaC (TIGR00581), PglL_A (pfam15864), Wzy_C (pfam04932), Wzy_C_2 (pfam11846), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PilA (COG4969), R_switched_YjbE (TIGR03717)
COG2928 (Uncharacterized membrane protein ), COG2331 (Predicted nucleic acid-binding protein, contains Zn-ribbon domain ), HNH (pfam01844), TPMT (pfam05724), ubiB (PRK04750)