myRT

myRT report for GCA_003286425.2_ASM328642v2

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Seq: CP043451.1 Mucilaginibacter rubeus strain P2 chromosome, complete genome (7719698 bp)
Overview 1 RT 1: 2516258-2520304 bp Neighborhood of RT #1 [2516258, 2520304] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like ORF6N RVT-GII GIIM ORF6N Feature: gene Location: 2516258-2517469 bp Ori: QEM03977.1 Feature: domain Description: Arm-DNA-bind_5 Location: 2516288-2516534 bp Feature: domain Description: Arm-DNA-bind_5 Location: 251 6288-251 6534 bp Feature: domain Description: Phage_int_SAM_5 Location: 2516615-2516900 bp Feature: domain Description: Phage_int_SAM_5 Location: 251 661 5-251 6900 bp Feature: domain Description: INTN1_C_like Location: 2516942-2517431 bp Feature: domain Description: INTN1 _C_like Location: 251 6942-251 7431 bp Feature: gene Location: 2517543-2517941 bp Ori: QEM03978.1 Feature: domain Description: ORF6N Location: 2517588-2517768 bp Feature: domain Description: ORF6N Location: 251 7588-251 7768 bp Feature: gene Location: 2518287-2519513 bp Ori: QEM03979.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2518500-2519154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 8500-251 91 54 bp Feature: domain Description: GIIM Note: maturase Location: 2519232-2519424 bp Feature: domain Description: GIIM Note: maturase Location: 251 9232-251 9424 bp Feature: gene Location: 2519614-2519931 bp Feature: domain Description: ORF6N Location: 2519623-2519689 bp Feature: domain Description: ORF6N Location: 251 9623-251 9689 bp Feature: gene Location: 2520221-2520304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), ORF6N (pfam10543), RVT-GII, GIIM (pfam08388)