myRT

myRT report for GCA_003286975.1_ASM328697v1

Download annotations/find similar RTs

Seq: CP030172.1 Klebsiella pneumoniae subsp. pneumoniae strain 12208 chromosome, complete genome (5214209 bp)
Overview 1 RT 1: 1727189-1733455 bp 2 RT 2: 3809387-3812162 bp 3 RT 3: 4585435-4595449 bp Neighborhood of RT #1 [1727189, 1733455] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #2 [3809387, 3812162] PRK10276 RVT-GII Neighborhood of RT #3 [4585435, 4595481] YeeA YeeA RVT-UG5 nitrilase YeeA TIGR02687 Feature: gene Location: 1727189-1728292 bp Ori: AWY23409.1 Feature: domain Description: STKc_PknB_like Location: 1727321-1727762 bp Feature: domain Description: STKc_PknB_like Location: 1 727321 -1 727762 bp Feature: gene Location: 1728362-1728604 bp Feature: gene Location: 1728851-1729951 bp Ori: AWY23410.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1729031-1729565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 729031 -1 729565 bp Feature: gene Location: 1730066-1732342 bp Ori: AWY23411.1 Feature: domain Description: AAA_15 Location: 1730099-1731107 bp Feature: domain Description: AAA_1 5 Location: 1 730099-1 731 1 07 bp Feature: gene Location: 1733225-1733455 bp Feature: gene Location: 3809387-3809704 bp Ori: AWY25272.1 Feature: domain Description: PRK10276 Location: 3809393-3809516 bp Feature: domain Description: PRK1 0276 Location: 3809393-380951 6 bp Feature: gene Location: 3809704-3809943 bp Feature: gene Location: 3810018-3811502 bp Ori: AWY25274.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3810420-3811110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381 0420-381 1 1 1 0 bp Feature: gene Location: 3811502-3811753 bp Feature: gene Location: 3811917-3812162 bp Feature: gene Location: 4585435-4587369 bp Ori: AWY25983.1 Gene: pglX Feature: domain Description: YeeA Location: 4586074-4586785 bp Feature: domain Description: YeeA Location: 4586074-4586785 bp Feature: domain Description: YeeA Location: 4586941-4587265 bp Feature: domain Description: YeeA Location: 4586941 -4587265 bp Feature: gene Location: 4587362-4587793 bp Feature: gene Location: 4587874-4590873 bp Ori: AWY25985.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4588336-4588825 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4588336-4588825 bp Feature: domain Description: nitrilase Location: 4590061-4590778 bp Feature: domain Description: nitrilase Location: 4590061 -4590778 bp Feature: gene Location: 4590876-4592660 bp Ori: AWY25986.1 Gene: pglX Feature: domain Description: YeeA Location: 4591575-4592592 bp Feature: domain Description: YeeA Location: 4591 575-4592592 bp Feature: gene Location: 4592878-4595481 bp Ori: AWY25987.1 Gene: pglZ Feature: domain Description: TIGR02687 Location: 4592896-4595449 bp Feature: domain Description: TIGR02687 Location: 4592896-4595449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, YeeA (COG1002), RVT-UG5, nitrilase (cl11424), TIGR02687 (TIGR02687 family protein)