myRT

myRT report for GCA_003287895.1_ASM328789v1

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Seq: CP030280.1 Blautia sp. N6H1-15 strain KCTC 15426 chromosome, complete genome (3297975 bp)
Overview 1 RT 1: 1458623-1466985 bp 2 RT 2: 2644647-2652351 bp 3 RT 3: 3120740-3129977 bp Neighborhood of RT #1 [1458623, 1467098] LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM RVT_N RVT-GII rSAM_nif11 LolD Neighborhood of RT #2 [2644647, 2652351] TcpE AAA_10 RVT-GII AAA_10 Neighborhood of RT #3 [3120740, 3129977] Zn_peptidase_2 RVT-Retrons Big_2 CarbopepD_reg_2 Big_2 Big_3_3 Big_3_3 Big_3_3 Feature: gene Location: 1458623-1460242 bp Ori: AWY97947.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1458761-1459001 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 458761 -1 459001 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1459202-1460063 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 459202-1 460063 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1460084-1460207 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 460084-1 460207 bp Feature: gene Location: 1460449-1460601 bp Feature: gene Location: 1460713-1462104 bp Ori: AWY97948.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1461028-1461652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 461 028-1 461 652 bp Feature: domain Description: GIIM Note: maturase Location: 1461709-1461925 bp Feature: domain Description: GIIM Note: maturase Location: 1 461 709-1 461 925 bp Feature: gene Location: 1463091-1463932 bp Feature: domain Description: RVT_N Location: 1463109-1463346 bp Feature: domain Description: RVT_N Location: 1 4631 09-1 463346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463412-1463646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46341 2-1 463646 bp Feature: gene Location: 1464942-1466297 bp Ori: AWY97949.1 Feature: domain Description: rSAM_nif11 Location: 1464987-1466280 bp Feature: domain Description: rSAM_nif1 1 Location: 1 464987-1 466280 bp Feature: gene Location: 1466319-1467098 bp Ori: AWY97950.1 Feature: domain Description: LolD Location: 1466331-1466985 bp Feature: domain Description: LolD Location: 1 466331 -1 466985 bp Feature: gene Location: 2644647-2645045 bp Ori: AWY98890.1 Feature: domain Description: TcpE Location: 2644665-2644962 bp Feature: domain Description: TcpE Location: 2644665-2644962 bp Feature: gene Location: 2645023-2646525 bp Feature: domain Description: AAA_10 Location: 2646352-2646523 bp Feature: domain Description: AAA_1 0 Location: 2646352-2646523 bp Feature: gene Location: 2647270-2649096 bp Ori: AWY98891.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2647570-2648269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2647570-2648269 bp Feature: gene Location: 2649131-2650153 bp Feature: domain Description: AAA_10 Location: 2649212-2650115 bp Feature: domain Description: AAA_1 0 Location: 264921 2-26501 1 5 bp Feature: gene Location: 2650153-2652351 bp Feature: gene Location: 3120740-3121450 bp Ori: AWY99224.1 Feature: domain Description: Zn_peptidase_2 Location: 3120770-3121430 bp Feature: domain Description: Zn_peptidase_2 Location: 31 20770-31 21 430 bp Feature: gene Location: 3121499-3121723 bp Feature: gene Location: 3121752-3122726 bp Ori: AWY99226.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3121917-3122472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 21 91 7-31 22472 bp Feature: gene Location: 3122759-3129418 bp Ori: AWY99227.1 Feature: domain Description: Big_2 Location: 3123032-3123212 bp Feature: domain Description: Big_2 Location: 31 23032-31 2321 2 bp Feature: domain Description: CarbopepD_reg_2 Location: 3123233-3123446 bp Feature: domain Description: CarbopepD_reg_2 Location: 31 23233-31 23446 bp Feature: domain Description: Big_2 Location: 3123494-3123674 bp Feature: domain Description: Big_2 Location: 31 23494-31 23674 bp Feature: domain Description: Big_3_3 Location: 3127898-3128084 bp Feature: domain Description: Big_3_3 Location: 31 27898-31 28084 bp Feature: domain Description: Big_3_3 Location: 3128213-3128603 bp Feature: domain Description: Big_3_3 Location: 31 2821 3-31 28603 bp Feature: domain Description: Big_3_3 Location: 3128864-3129062 bp Feature: domain Description: Big_3_3 Location: 31 28864-31 29062 bp Feature: gene Location: 3129468-3129977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), rSAM_nif11 (TIGR04064), LolD (COG1136), TcpE (pfam12648), AAA_10 (pfam12846)
Zn_peptidase_2 (pfam04298), RVT-Retrons, Big_2 (pfam02368), CarbopepD_reg_2 (pfam13715), Big_3_3 (pfam13750)