myRT

myRT report for GCA_003288435.1_ASM328843v1

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Seq: CP030327.1 Pseudomonas aeruginosa strain AR_458 chromosome, complete genome (6685102 bp)
Overview 1 RT 1: 1535458-1540176 bp 2 RT 2: 2383053-2391896 bp Neighborhood of RT #1 [1535458, 1540176] DUF3085 RVT-GII GIIM Neighborhood of RT #2 [2383053, 2391904] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 1535458-1535787 bp Ori: AXA05284.1 Feature: domain Description: DUF3085 Location: 1535488-1535758 bp Feature: domain Description: DUF3085 Location: 1 535488-1 535758 bp Feature: gene Location: 1535889-1536686 bp Feature: gene Location: 1537026-1538108 bp Ori: AXA05339.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1537074-1537689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 537074-1 537689 bp Feature: domain Description: GIIM Note: maturase Location: 1537746-1537962 bp Feature: domain Description: GIIM Note: maturase Location: 1 537746-1 537962 bp Feature: gene Location: 1538817-1539533 bp Feature: gene Location: 1539784-1540176 bp Feature: gene Location: 2383053-2383727 bp Ori: AXA04051.1 Feature: domain Description: NTP_transferase_like_1 Location: 2383059-2383698 bp Feature: domain Description: NTP_transferase_like_1 Location: 2383059-2383698 bp Feature: gene Location: 2383724-2384740 bp Ori: AXA03886.1 Feature: domain Description: COG3178 Location: 2383727-2384726 bp Feature: domain Description: COG31 78 Location: 2383727-2384726 bp Feature: gene Location: 2386012-2387724 bp Ori: AXA02237.1 Feature: domain Description: RVT_N Location: 2386069-2386312 bp Feature: domain Description: RVT_N Location: 2386069-238631 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386357-2386990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386357-2386990 bp Feature: domain Description: YkfC Location: 2387203-2387353 bp Feature: domain Description: YkfC Location: 2387203-2387353 bp Feature: domain Description: HNH Note: nucleases Location: 2387530-2387668 bp Feature: domain Description: HNH Note: nucleases Location: 2387530-2387668 bp Feature: gene Location: 2387875-2390631 bp Ori: AXA02720.1 Feature: domain Description: LptD Location: 2388052-2390617 bp Feature: domain Description: LptD Location: 2388052-239061 7 bp Feature: gene Location: 2390690-2391904 bp Ori: AXA06890.1 Gene: surA Feature: domain Description: PRK10770 Location: 2390702-2391896 bp Feature: domain Description: PRK1 0770 Location: 2390702-2391 896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3085 (pfam11284), RVT-GII, GIIM (pfam08388), NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)