myRT

myRT report for GCA_003290205.1_ASM329020v1

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Seq: CP029981.1 Escherichia coli strain 99-3165 chromosome, complete genome (4703465 bp)
Overview 1 RT 1: 368831-373335 bp 2 RT 2: 1159211-1162975 bp 3 RT 3: 2314824-2318036 bp Neighborhood of RT #1 [368831, 373358] InsE PHA02517 RVT-GII GIIM PHA02517 PRK10681 Neighborhood of RT #2 [1159211, 1163040] HTH_23 InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [2314824, 2318101] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 368831-369157 bp Feature: domain Description: InsE Location: 368834-369155 bp Feature: domain Description: InsE Location: 368834-3691 55 bp Feature: gene Location: 369157-369636 bp Feature: domain Description: PHA02517 Location: 369217-369571 bp Feature: domain Description: PHA0251 7 Location: 36921 7-369571 bp Feature: gene Location: 370228-371751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370501-371233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370501 -371 233 bp Feature: domain Description: GIIM Note: maturase Location: 371308-371506 bp Feature: domain Description: GIIM Note: maturase Location: 371 308-371 506 bp Feature: gene Location: 371928-372314 bp Feature: domain Description: PHA02517 Location: 371931-372312 bp Feature: domain Description: PHA0251 7 Location: 371 931 -37231 2 bp Feature: gene Location: 372576-373358 bp Feature: domain Description: PRK10681 Location: 372579-373335 bp Feature: domain Description: PRK1 0681 Location: 372579-373335 bp Feature: gene Location: 1159211-1159888 bp Feature: domain Description: HTH_23 Location: 1159271-1159382 bp Feature: domain Description: HTH_23 Location: 1 1 59271 -1 1 59382 bp Feature: domain Description: InsE Location: 1159514-1159868 bp Feature: domain Description: InsE Location: 1 1 5951 4-1 1 59868 bp Feature: gene Location: 1159925-1160197 bp Feature: domain Description: PHA02517 Location: 1159928-1160186 bp Feature: domain Description: PHA0251 7 Location: 1 1 59928-1 1 601 86 bp Feature: gene Location: 1160374-1161897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1160647-1161379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 60647-1 1 61 379 bp Feature: domain Description: GIIM Note: maturase Location: 1161454-1161652 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 61 454-1 1 61 652 bp Feature: gene Location: 1161851-1162276 bp Feature: gene Location: 1162489-1163040 bp Feature: domain Description: PHA02517 Location: 1162657-1162975 bp Feature: domain Description: PHA0251 7 Location: 1 1 62657-1 1 62975 bp Feature: gene Location: 2314824-2314994 bp Feature: gene Location: 2315022-2315438 bp Feature: domain Description: PHA02517 Location: 2315025-2315430 bp Feature: domain Description: PHA0251 7 Location: 231 5025-231 5430 bp Feature: gene Location: 2315561-2317084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2315834-2316566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 5834-231 6566 bp Feature: domain Description: GIIM Note: maturase Location: 2316641-2316839 bp Feature: domain Description: GIIM Note: maturase Location: 231 6641 -231 6839 bp Feature: gene Location: 2317038-2317463 bp Feature: gene Location: 2317676-2318101 bp Feature: domain Description: PHA02517 Location: 2317697-2318036 bp Feature: domain Description: PHA0251 7 Location: 231 7697-231 8036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10681 (DNA-binding transcriptional repressor DeoR; Provisional), HTH_23 (pfam13384)

Seq: CP029980.1 Escherichia coli strain 99-3165 plasmid unnamed2, complete sequence (117740 bp)
Overview 1 RT 1: 7320-10868 bp Neighborhood of RT #1 [7320, 10933] COG3547 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 7320-7817 bp Feature: domain Description: COG3547 Location: 7329-7782 bp Feature: domain Description: COG3547 Location: 732 9-7782 bp Feature: gene Location: 7974-8420 bp Feature: domain Description: PHA02517 Location: 7977-8418 bp Feature: domain Description: PHA02 517 Location: 7977-8418 bp Feature: gene Location: 8537-10060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8810-9542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8810-9542 bp Feature: domain Description: GIIM Note: maturase Location: 9617-9815 bp Feature: domain Description: GIIM Note: maturase Location: 9617-9815 bp Feature: gene Location: 10014-10439 bp Feature: gene Location: 10652-10933 bp Feature: domain Description: PHA02517 Location: 10658-10868 bp Feature: domain Description: PHA02 517 Location: 10658-10868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CP029982.1 Escherichia coli strain 99-3165 plasmid unnamed3, complete sequence (71543 bp)
Overview 1 RT 1: 14029-17717 bp 2 RT 2: 61319-65010 bp Neighborhood of RT #1 [14029, 17782] COG3547 PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [61319, 65075] COG3547 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 14029-14622 bp Feature: domain Description: COG3547 Location: 14044-14512 bp Feature: domain Description: COG3 547 Location: 14044-14512 bp Feature: gene Location: 14625-15071 bp Feature: domain Description: PHA02517 Location: 14628-15069 bp Feature: domain Description: PHA02517 Location: 14628-15069 bp Feature: gene Location: 15188-16711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15461-16193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15461-16193 bp Feature: domain Description: GIIM Note: maturase Location: 16268-16466 bp Feature: domain Description: GIIM Note: maturase Location: 16268-16466 bp Feature: gene Location: 16665-17090 bp Feature: gene Location: 17303-17782 bp Feature: domain Description: PHA02517 Location: 17363-17717 bp Feature: domain Description: PHA02517 Location: 173 63 -17717 bp Feature: gene Location: 61319-61912 bp Feature: domain Description: COG3547 Location: 61334-61802 bp Feature: domain Description: COG3 547 Location: 613 3 4-61802 bp Feature: gene Location: 61915-62361 bp Feature: domain Description: PHA02517 Location: 61918-62359 bp Feature: domain Description: PHA02517 Location: 61918-623 59 bp Feature: gene Location: 62478-64001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62751-63483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62751-63 483 bp Feature: domain Description: GIIM Note: maturase Location: 63558-63756 bp Feature: domain Description: GIIM Note: maturase Location: 63 558-63 756 bp Feature: gene Location: 63955-64380 bp Feature: gene Location: 64593-65075 bp Feature: domain Description: PHA02517 Location: 64656-65010 bp Feature: domain Description: PHA02517 Location: 64656-65010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)