myRT

myRT report for GCA_003308975.1_ASM330897v1

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Seq: CP030768.1 Escherichia coli strain 2017C-4173W12 chromosome, complete genome (5300308 bp)
Overview 1 RT 1: 873010-876418 bp 2 RT 2: 2915643-2919299 bp Neighborhood of RT #1 [873010, 876552] Dps RVT-GII GIIM IstB_IS21_ATP IstB_IS21 COG4584 COG4584 Neighborhood of RT #2 [2915643, 2919301] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 873010-873174 bp Feature: domain Description: Dps Location: 873013-873172 bp Feature: domain Description: Dps Location: 87301 3-8731 72 bp Feature: gene Location: 873335-873502 bp Feature: gene Location: 873528-874577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 873546-874200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 873546-874200 bp Feature: domain Description: GIIM Note: maturase Location: 874278-874503 bp Feature: domain Description: GIIM Note: maturase Location: 874278-874503 bp Feature: gene Location: 874719-875474 bp Feature: domain Description: IstB_IS21_ATP Location: 874791-874875 bp Feature: domain Description: IstB_IS21 _ATP Location: 874791 -874875 bp Feature: domain Description: IstB_IS21 Location: 874884-875409 bp Feature: domain Description: IstB_IS21 Location: 874884-875409 bp Feature: gene Location: 875491-876552 bp Feature: domain Description: COG4584 Location: 875497-875890 bp Feature: domain Description: COG4584 Location: 875497-875890 bp Feature: domain Description: COG4584 Location: 876004-876418 bp Feature: domain Description: COG4584 Location: 876004-87641 8 bp Feature: gene Location: 2915643-2916602 bp Feature: domain Description: YhhI Location: 2915649-2915994 bp Feature: domain Description: YhhI Location: 291 5649-291 5994 bp Feature: domain Description: YhhI Location: 2916051-2916405 bp Feature: domain Description: YhhI Location: 291 6051 -291 6405 bp Feature: domain Description: YhhI Location: 2916405-2916585 bp Feature: domain Description: YhhI Location: 291 6405-291 6585 bp Feature: gene Location: 2916630-2916770 bp Feature: gene Location: 2917134-2918384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2917338-2917995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 7338-291 7995 bp Feature: domain Description: GIIM Note: maturase Location: 2918076-2918298 bp Feature: domain Description: GIIM Note: maturase Location: 291 8076-291 8298 bp Feature: gene Location: 2918395-2918655 bp Feature: domain Description: YhhI Location: 2918470-2918641 bp Feature: domain Description: YhhI Location: 291 8470-291 8641 bp Feature: gene Location: 2918831-2919301 bp Feature: domain Description: YhhI Location: 2918834-2919197 bp Feature: domain Description: YhhI Location: 291 8834-291 91 97 bp Feature: domain Description: YhhI Location: 2919254-2919299 bp Feature: domain Description: YhhI Location: 291 9254-291 9299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dps (COG0783), RVT-GII, GIIM (pfam08388), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), YhhI (COG5433)

Seq: CP030770.1 Escherichia coli strain 2017C-4173W12 plasmid p2017C-4173W12, complete sequence (149680 bp)
Overview 1 RT 1: 105382-108817 bp 2 RT 2: 119564-122239 bp Neighborhood of RT #1 [105382, 108882] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [119564, 122247] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 105382-105786 bp Feature: domain Description: InsE Location: 105412-105748 bp Feature: domain Description: InsE Location: 105412 -105748 bp Feature: gene Location: 105815-106171 bp Feature: domain Description: PHA02517 Location: 105818-106127 bp Feature: domain Description: PHA02 517 Location: 105818-10612 7 bp Feature: gene Location: 106288-107811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106561-107293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106561-1072 93 bp Feature: domain Description: GIIM Note: maturase Location: 107368-107566 bp Feature: domain Description: GIIM Note: maturase Location: 107368-107566 bp Feature: gene Location: 107765-108190 bp Feature: gene Location: 108403-108882 bp Feature: domain Description: PHA02517 Location: 108463-108817 bp Feature: domain Description: PHA02 517 Location: 108463-108817 bp Feature: gene Location: 119564-119890 bp Feature: domain Description: InsE Location: 119567-119888 bp Feature: domain Description: InsE Location: 119567-119888 bp Feature: gene Location: 119890-120369 bp Feature: domain Description: PHA02517 Location: 119950-120304 bp Feature: domain Description: PHA02 517 Location: 119950-12 0304 bp Feature: gene Location: 120961-121464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121234-121306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 12 34-12 1306 bp Feature: gene Location: 121503-121814 bp Feature: domain Description: PRK10173 Location: 121506-121725 bp Feature: domain Description: PRK10173 Location: 12 1506-12 172 5 bp Feature: gene Location: 121798-122247 bp Feature: domain Description: PRK10173 Location: 121801-122239 bp Feature: domain Description: PRK10173 Location: 12 1801-12 2 2 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)