myRT

myRT report for GCA_003312525.2_ASM331252v2

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Seq: CP030783.2 Escherichia albertii strain 2012EL-1823B chromosome, complete genome (4809821 bp)
Overview 1 RT 1: 1009424-1014707 bp 2 RT 2: 4074055-4078818 bp Neighborhood of RT #1 [1009424, 1014712] DinI RVT-Retrons Q P Neighborhood of RT #2 [4074055, 4078910] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 1009424-1009657 bp Feature: domain Description: DinI Location: 1009466-1009652 bp Feature: domain Description: DinI Location: 1 009466-1 009652 bp Feature: gene Location: 1009745-1009906 bp Feature: gene Location: 1009999-1011879 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1010263-1010887 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 0263-1 01 0887 bp Feature: gene Location: 1011921-1012946 bp Feature: domain Description: Q Location: 1011927-1012941 bp Feature: domain Description: Q Location: 1 01 1 927-1 01 2941 bp Feature: gene Location: 1012946-1014712 bp Feature: domain Description: P Location: 1012973-1014707 bp Feature: domain Description: P Location: 1 01 2973-1 01 4707 bp Feature: gene Location: 4074055-4075233 bp Feature: domain Description: PRK09692 Location: 4074064-4075216 bp Feature: domain Description: PRK09692 Location: 4074064-407521 6 bp Feature: gene Location: 4075250-4075987 bp Feature: domain Description: SLATT_5 Location: 4075349-4075955 bp Feature: domain Description: SLATT_5 Location: 4075349-4075955 bp Feature: gene Location: 4076086-4077495 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4076323-4076935 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4076323-4076935 bp Feature: gene Location: 4077818-4078390 bp Feature: domain Description: Psu Location: 4077836-4078373 bp Feature: domain Description: Psu Location: 4077836-4078373 bp Feature: gene Location: 4078464-4078910 bp Feature: domain Description: PRK09678 Location: 4078473-4078542 bp Feature: domain Description: PRK09678 Location: 4078473-4078542 bp Feature: domain Description: PRK09678 Location: 4078668-4078818 bp Feature: domain Description: PRK09678 Location: 4078668-407881 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535), PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: CP030785.2 Escherichia albertii strain 2012EL-1823B plasmid unnamed2, complete sequence (81130 bp)
Overview 1 RT 1: 70384-73700 bp Neighborhood of RT #1 [70384, 73702] RVT-UG4 PRK15211 Feature: gene Location: 70384-70566 bp Feature: gene Location: 70731-71450 bp Feature: gene Location: 71461-72468 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 71818-72262 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 71818-72 2 62 bp Feature: gene Location: 72517-73023 bp Feature: gene Location: 73010-73702 bp Feature: domain Description: PRK15211 Location: 73025-73700 bp Feature: domain Description: PRK152 11 Location: 7302 5-73700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK15211 (fimbrial chaperone)