myRT

myRT report for GCA_003312875.1_ASM331287v1

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Seq: CP015163.1 Amycolatopsis albispora strain WP1 chromosome, complete genome (9121443 bp)
Overview 1 RT 1: 6321449-6324646 bp 2 RT 2: 6418078-6424397 bp Neighborhood of RT #1 [6321449, 6324646] YfmG RVT-G2Lb QueC Neighborhood of RT #2 [6418078, 6424405] COG5421 COG5421 IS285 RVT-GII GIIM Transposase_mut PRK07396 Feature: gene Location: 6321449-6321910 bp Feature: gene Location: 6321907-6322464 bp Ori: AXB46116.1 Feature: domain Description: YfmG Location: 6322033-6322459 bp Feature: domain Description: YfmG Location: 6322033-6322459 bp Feature: gene Location: 6322470-6323249 bp Ori: AXB46117.1 Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 6322689-6323205 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 6322689-6323205 bp Feature: gene Location: 6323451-6324164 bp Ori: AXB46118.1 Feature: domain Description: QueC Location: 6323496-6324156 bp Feature: domain Description: QueC Location: 6323496-63241 56 bp Feature: gene Location: 6324158-6324646 bp Feature: gene Location: 6418078-6419547 bp Ori: AXB48909.1 Feature: domain Description: COG5421 Location: 6418576-6418864 bp Feature: domain Description: COG5421 Location: 641 8576-641 8864 bp Feature: domain Description: COG5421 Location: 6419083-6419392 bp Feature: domain Description: COG5421 Location: 641 9083-641 9392 bp Feature: gene Location: 6419720-6420156 bp Feature: domain Description: IS285 Location: 6419726-6420008 bp Feature: domain Description: IS285 Location: 641 9726-6420008 bp Feature: gene Location: 6420265-6421701 bp Ori: AXB48910.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6420589-6421270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6420589-6421 270 bp Feature: domain Description: GIIM Note: maturase Location: 6421342-6421576 bp Feature: domain Description: GIIM Note: maturase Location: 6421 342-6421 576 bp Feature: gene Location: 6422293-6423129 bp Feature: domain Description: Transposase_mut Location: 6422353-6423121 bp Feature: domain Description: Transposase_mut Location: 6422353-64231 21 bp Feature: gene Location: 6423956-6424405 bp Ori: AXB46182.1 Feature: domain Description: PRK07396 Location: 6423965-6424397 bp Feature: domain Description: PRK07396 Location: 6423965-6424397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-G2Lb, QueC (pfam06508), COG5421 (Transposase ), IS285 (COG3328), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), PRK07396 (dihydroxynaphthoic acid synthetase; Validated)