myRT

myRT report for GCA_003324755.1_ASM332475v1

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Seq: CP029989.1 Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 chromosome, complete genome (5361355 bp)
Overview 1 RT 1: 849836-855656 bp 2 RT 2: 2163902-2168019 bp Neighborhood of RT #1 [849836, 855661] CaiF_GrlA PerC RVT-UG4 autotrans_barl PRK15471 Neighborhood of RT #2 [2163902, 2168042] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 849836-850342 bp Ori: AXC70902.1 Feature: domain Description: CaiF_GrlA Location: 849905-850253 bp Feature: domain Description: CaiF_GrlA Location: 849905-850253 bp Feature: gene Location: 850352-850630 bp Ori: AXC70903.1 Feature: domain Description: PerC Location: 850367-850526 bp Feature: domain Description: PerC Location: 850367-850526 bp Feature: gene Location: 851198-851926 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 851312-851753 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 851 31 2-851 753 bp Feature: gene Location: 851993-854611 bp Ori: AXC70904.1 Feature: domain Description: autotrans_barl Location: 853286-854609 bp Feature: domain Description: autotrans_barl Location: 853286-854609 bp Feature: gene Location: 854690-855661 bp Ori: AXC74864.1 Feature: domain Description: PRK15471 Location: 854696-855656 bp Feature: domain Description: PRK1 5471 Location: 854696-855656 bp Feature: gene Location: 2163902-2164117 bp Feature: gene Location: 2164208-2164489 bp Ori: AXC72035.1 Feature: domain Description: HTH_XRE Location: 2164223-2164388 bp Feature: domain Description: HTH_XRE Location: 21 64223-21 64388 bp Feature: gene Location: 2164482-2165582 bp Ori: AXC72036.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2164623-2165175 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 64623-21 651 75 bp Feature: gene Location: 2165654-2167159 bp Ori: AXC72037.1 Feature: domain Description: PRK13889 Location: 2165657-2166245 bp Feature: domain Description: PRK1 3889 Location: 21 65657-21 66245 bp Feature: gene Location: 2167737-2168042 bp Ori: AXC72038.1 Feature: domain Description: TraD Location: 2167842-2168019 bp Feature: domain Description: TraD Location: 21 67842-21 6801 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CaiF_GrlA (pfam07180), PerC (pfam06069), RVT-UG4, autotrans_barl (TIGR01414), PRK15471 (chain length determinant protein WzzB; Provisional), HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)