myRT

myRT report for GCA_003325035.1_ASM332503v1

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Seq: CP030180.1 Salmonella enterica strain SA20100201 chromosome, complete genome (5195044 bp)
Overview 1 RT 1: 645678-651328 bp 2 RT 2: 878859-884681 bp 3 RT 3: 1211942-1215863 bp Neighborhood of RT #1 [645678, 651328] FimC PRK15223 RVT-UG4 Neighborhood of RT #2 [878859, 884686] CaiF_GrlA PerC RVT-UG4 autotrans_barl PRK15471 Neighborhood of RT #3 [1211942, 1215863] RVT-AbiP2 BamE Feature: gene Location: 645678-646469 bp Ori: AXD08091.1 Feature: domain Description: FimC Location: 645762-646455 bp Feature: domain Description: FimC Location: 645762-646455 bp Feature: gene Location: 646596-649106 bp Ori: AXD08092.1 Feature: domain Description: PRK15223 Location: 646605-649104 bp Feature: domain Description: PRK1 5223 Location: 646605-6491 04 bp Feature: gene Location: 649123-650100 bp Ori: AXD08093.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 649480-649927 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 649480-649927 bp Feature: gene Location: 650150-650614 bp Feature: gene Location: 650960-651328 bp Feature: gene Location: 878859-879365 bp Ori: AXD08291.1 Feature: domain Description: CaiF_GrlA Location: 878928-879276 bp Feature: domain Description: CaiF_GrlA Location: 878928-879276 bp Feature: gene Location: 879375-879653 bp Ori: AXD08292.1 Feature: domain Description: PerC Location: 879390-879549 bp Feature: domain Description: PerC Location: 879390-879549 bp Feature: gene Location: 880220-880948 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 880334-880775 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 880334-880775 bp Feature: gene Location: 881015-883636 bp Ori: AXD08293.1 Feature: domain Description: autotrans_barl Location: 882311-883634 bp Feature: domain Description: autotrans_barl Location: 88231 1 -883634 bp Feature: gene Location: 883715-884686 bp Ori: AXD12005.1 Feature: domain Description: PRK15471 Location: 883721-884681 bp Feature: domain Description: PRK1 5471 Location: 883721 -884681 bp Feature: gene Location: 1211942-1212193 bp Feature: gene Location: 1212391-1212586 bp Feature: gene Location: 1212587-1213918 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1213103-1213256 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 21 31 03-1 21 3256 bp Feature: gene Location: 1214857-1215234 bp Ori: AXD08568.1 Feature: domain Description: BamE Location: 1214869-1215187 bp Feature: domain Description: BamE Location: 1 21 4869-1 21 51 87 bp Feature: gene Location: 1215667-1215863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), PRK15223 (fimbrial biogenesis outer membrane usher protein), RVT-UG4, CaiF_GrlA (pfam07180), PerC (pfam06069), autotrans_barl (TIGR01414), PRK15471 (chain length determinant protein WzzB; Provisional), RVT-AbiP2, BamE (COG2913)