myRT

myRT report for GCA_003330765.1_ASM333076v1

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Seq: CP024904.1 Burkholderia pyrrocinia strain mHSR5 chromosome mHSR5_C, complete sequence (984905 bp)
Overview 1 RT 1: 939627-943004 bp Neighborhood of RT #1 [939627, 943075] dTDP_HR_like_SDR_e RVT-Retrons Histone_HNS Feature: gene Location: 939627-939833 bp Feature: gene Location: 939853-940818 bp Ori: AXF26036.1 Feature: domain Description: dTDP_HR_like_SDR_e Location: 939892-940783 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 939892-940783 bp Feature: gene Location: 941072-942421 bp Ori: AXF26037.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 941537-942173 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 941 537-9421 73 bp Feature: gene Location: 942394-942599 bp Feature: gene Location: 942746-943075 bp Ori: AXF26038.1 Feature: domain Description: Histone_HNS Location: 942767-943004 bp Feature: domain Description: Histone_HNS Location: 942767-943004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dTDP_HR_like_SDR_e (cd05254), RVT-Retrons, Histone_HNS (pfam00816)

Seq: CP024902.1 Burkholderia pyrrocinia strain mHSR5 chromosome mHSR5_A, complete sequence (3619008 bp)
Overview 1 RT 1: 800793-805540 bp 2 RT 2: 900544-906851 bp Neighborhood of RT #1 [800793, 805551] RVT-GII GIIM MscS GMP_PMI Neighborhood of RT #2 [900544, 906931] 3HBOH RVT-GII GIIM Kex1 Feature: gene Location: 800793-801041 bp Feature: gene Location: 801108-801451 bp Feature: gene Location: 801496-802866 bp Ori: AXF19728.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801832-802447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801832 -802 447 bp Feature: domain Description: GIIM Note: maturase Location: 802504-802708 bp Feature: domain Description: GIIM Note: maturase Location: 802 504-802 708 bp Feature: gene Location: 802970-803782 bp Ori: AXF19729.1 Feature: domain Description: MscS Location: 803036-803741 bp Feature: domain Description: MscS Location: 803036-803741 bp Feature: gene Location: 804124-805551 bp Ori: AXF19730.1 Feature: domain Description: GMP_PMI Location: 804133-805540 bp Feature: domain Description: GMP_PMI Location: 804133-805540 bp Feature: gene Location: 900544-902634 bp Ori: AXF22182.1 Feature: domain Description: 3HBOH Location: 900610-902629 bp Feature: domain Description: 3HBOH Location: 900610-902 62 9 bp Feature: gene Location: 902680-903026 bp Feature: gene Location: 903071-904441 bp Ori: AXF19803.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903407-904022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903407-90402 2 bp Feature: domain Description: GIIM Note: maturase Location: 904079-904283 bp Feature: domain Description: GIIM Note: maturase Location: 904079-9042 83 bp Feature: gene Location: 904741-905008 bp Feature: gene Location: 905093-906931 bp Ori: AXF19804.1 Feature: domain Description: Kex1 Location: 905330-906851 bp Feature: domain Description: Kex1 Location: 905330-906851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MscS (COG0668), GMP_PMI (TIGR01479), 3HBOH (pfam10605), Kex1 (COG2939)

Seq: CP024903.1 Burkholderia pyrrocinia strain mHSR5 chromosome mHSR5_B, complete sequence (3400486 bp)
Overview 1 RT 1: 527963-530047 bp Neighborhood of RT #1 [527963, 530760] OmpA ArgA RVT-UG16 Feature: gene Location: 527963-528142 bp Feature: domain Description: OmpA Location: 527966-528137 bp Feature: domain Description: OmpA Location: 527966-52813 7 bp Feature: gene Location: 528370-528813 bp Ori: AXF22762.1 Feature: domain Description: ArgA Location: 528385-528769 bp Feature: domain Description: ArgA Location: 5283 85-528769 bp Feature: gene Location: 529279-530760 bp Ori: AXF22763.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 529639-530047 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 52963 9-53 0047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpA (pfam00691), ArgA (COG1246), RVT-UG16