myRT

myRT report for GCA_003351765.1_ASM335176v1

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Seq: CP031229.1 Ornithinimicrobium sp. AMA3305 chromosome, complete genome (3918911 bp)
Overview 1 RT 1: 304259-308930 bp 2 RT 2: 1619823-1622885 bp Neighborhood of RT #1 [304259, 308930] COG3636 RVT-GII GIIM Transposase_mut Neighborhood of RT #2 [1619823, 1622885] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III cas_cas6 Feature: gene Location: 304259-304555 bp Ori: AXH95007.1 Feature: domain Description: COG3636 Location: 304268-304547 bp Feature: domain Description: COG3636 Location: 304268-304547 bp Feature: gene Location: 304668-305081 bp Feature: gene Location: 306049-307299 bp Ori: AXH97811.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 306253-306910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 306253-30691 0 bp Feature: domain Description: GIIM Note: maturase Location: 306997-307195 bp Feature: domain Description: GIIM Note: maturase Location: 306997-3071 95 bp Feature: gene Location: 307490-308776 bp Ori: AXH95009.1 Feature: domain Description: Transposase_mut Location: 307520-308666 bp Feature: domain Description: Transposase_mut Location: 307520-308666 bp Feature: gene Location: 308820-308930 bp Feature: gene Location: 1619823-1620107 bp Ori: AXH97989.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1619838-1620066 bp Feature: domain Description: Cas2_I_II_III Location: 1 61 9838-1 620066 bp Feature: gene Location: 1620098-1621972 bp Ori: AXH95955.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1620308-1620908 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 620308-1 620908 bp Feature: domain Description: Cas1_I-II-III Location: 1620977-1621934 bp Feature: domain Description: Cas1 _I-II-III Location: 1 620977-1 621 934 bp Feature: gene Location: 1621956-1622702 bp Ori: AXH95956.1 Feature: domain Description: cas_cas6 Location: 1622070-1622661 bp Feature: domain Description: cas_cas6 Location: 1 622070-1 622661 bp Feature: gene Location: 1622703-1622885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3636 (DNA-binding prophage protein ), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), cas_cas6 (TIGR01877)